Hydrogenobaculum sp. SN: HydSN_1502
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Entry
HydSN_1502 CDS
T02516
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hys
Hydrogenobaculum sp. SN
Pathway
hys03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HydSN_1502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hys03400
]
HydSN_1502
Enzymes [BR:
hys01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HydSN_1502
DNA repair and recombination proteins [BR:
hys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HydSN_1502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Flagellar_rod
MID_MedPIWI
Motif
Other DBs
NCBI-ProteinID:
AGH94068
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All DBs
Position
1387479..1388228
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AA seq
249 aa
AA seq
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MNSTFIYETIGFGKVYIDKKLRESVKNSVDNVENKNQETLNNNSATIYKSTASDLLQQLK
AFYETCKDCKKCKLSEQRTQVVFGDGNPDTGIMFVGEAPGADEDVEGKPFVGKAGKLLTQ
ELERVGLLRQRDYYITNVVKCRPPDNRTPEEQEMITCSYILKEEIKLIKPKLVIALGRTA
AVGLSGIKQISPTKVRGSFILANLKSPVLAPGTKIFATYHPSYLLRNPNELSNFREDILK
IKSLIDSLR
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcacttttatatatgaaactataggttttggcaaagtttatattgataaaaaa
ttaagagaaagtgtaaaaaatagcgtagataacgttgaaaataaaaatcaagagacctta
aataacaattctgccacgatttataagtcaaccgcatcagatttgttacagcaattaaaa
gctttttatgagacttgtaaagattgtaagaaatgcaaactatcagagcaaaggactcaa
gtggtgtttggtgatggtaaccctgatactggtataatgtttgttggagaagcaccaggg
gctgatgaagatgttgagggtaaaccgtttgttggaaaagctggcaaacttttaactcag
gaacttgaaagagtggggcttttaagacaaagggattattatataacaaatgttgtgaaa
tgtagacccccagacaatagaactccagaagagcaagagatgataacgtgctcttatata
ctaaaagaagagataaagcttataaagccaaagcttgtaatagctcttggaagaacggcg
gcagtcgggctttctggcataaaacagatatctcccaccaaggtaaggggaagttttata
ttggcaaacctaaaaagtcccgttttagcacctgggacaaaaatatttgccacttaccat
ccttcctatcttcttaggaatccaaacgaacttagcaattttagagaagatattttaaaa
attaaaagccttatagacagcttacgttag
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