Hydrogenobaculum sp. SN: HydSN_1625
Help
Entry
HydSN_1625 CDS
T02516
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
hys
Hydrogenobaculum sp. SN
Pathway
hys00541
Biosynthesis of various nucleotide sugars
hys01100
Metabolic pathways
hys01250
Biosynthesis of nucleotide sugars
Module
hys_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hys00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HydSN_1625
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hys01005
]
HydSN_1625
Enzymes [BR:
hys01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
HydSN_1625
Lipopolysaccharide biosynthesis proteins [BR:
hys01005
]
Lipid A
HydSN_1625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AGH94186
LinkDB
All DBs
Position
1513761..1514558
Genome browser
AA seq
265 aa
AA seq
DB search
MEKKFLIIAGPCVIESYELCFEVASHLKELSLKYKEFDFVFKASFDKANRTSVNSYRGPG
LEKGLEILKRIKEEFFMPVTTDVHETYQVKPVAEVVDIIQIPAFLCRQTDLLLVAAETGK
SVNVKKGQFLAPWDTKYIIDKLKSKNKDATFYLTERGSSFGYNNLVVDMRSLPIMRQYAN
VIFDATHSVQLPGGAGRSSSGQREFVPYLIRAAVAVGVDGVFMETHPNPEKALSDGPNSI
PLKDLESILIQIKAIKRALEDINQS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaatttcttataatagctggtccttgtgtaatagagtcttatgagctttgc
tttgaagtggcctctcatctaaaagagctttctttgaagtataaggagtttgattttgta
tttaaggcttcttttgataaggccaatagaacatctgtaaactcctatagaggacctggt
cttgaaaaaggtcttgagattttaaaaagaataaaagaagaattttttatgccagttacc
acggatgtccatgaaacttatcaagtaaaacctgtggcagaggtggtggatatcattcaa
ataccggcttttttatgtaggcaaacggatttacttcttgtcgctgcagaaactggtaaa
agtgtgaacgttaaaaaaggacaatttttagccccctgggatactaagtatataatagat
aagctaaaatcaaaaaacaaagacgctacattttaccttacagaaagaggttcttccttt
ggctataacaaccttgtggtggatatgagatcactacctattatgagacagtatgcaaac
gttatatttgatgctactcacagtgttcagcttcctggtggtgcaggtaggtcttcttct
ggtcaaagggaatttgtgccctatcttataagggctgctgtggcagtgggtgtagatggg
gtttttatggaaacgcatccaaatccagaaaaggcgctgtccgatggtccaaactctata
cctttaaaagatttagagagtattttaattcaaataaaagccataaaacgagccttagag
gatataaaccaaagttaa
DBGET
integrated database retrieval system
