Hydrogenobaculum sp. SN: HydSN_1649
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Entry
HydSN_1649 CDS
T02516
Name
(GenBank) transcription elongation factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
hys
Hydrogenobaculum sp. SN
Brite
KEGG Orthology (KO) [BR:
hys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hys03021
]
HydSN_1649
03009 Ribosome biogenesis [BR:
hys03009
]
HydSN_1649
Transcription machinery [BR:
hys03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HydSN_1649
Ribosome biogenesis [BR:
hys03009
]
Prokaryotic type
rRNA transcription factors
HydSN_1649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
S1
KH_2
NusA_N
KH_1
KH_NusA_C
KH_KhpA-B
SusE
DUF3562
Motif
Other DBs
NCBI-ProteinID:
AGH94207
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All DBs
Position
1538681..1539649
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AA seq
322 aa
AA seq
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MVKNIKKLIENVAKEKDIPAKIVENALKNAIAYGIRKEKHIRGKIYIDFADDDTITAYII
SGKEKTKLDISTEDLNRIAAYAAKEEFLKELENAERERGFLEYVSQEGNIVHGIVREITK
DQTAIVDLGPIDAELPRKEQIPKESFKKNDRVKALLFSVQKERGRPVLLLSRTHPKFLRR
LLEAEIPEVASGLVKIVSVAREPGEKAKVVVDTEDKKIDPVGVVIGIKGSKINPISKELA
GEHIDVVRYSEDKKKFLENLFFPAKILDIRESGNQIEVAVDKDQVSLAIGKRGINTKLAY
KILGKHIDVMSKEDFDKLKKLS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagaatataaagaaactaatagaaaacgtcgcaaaagaaaaagatataccggct
aaaatagtggaaaatgctttaaaaaacgctatagcctacggcattagaaaagaaaaacat
ataaggggaaaaatttatatagattttgcagatgatgatactataacagcttatataatt
tctggaaaagaaaaaactaaacttgatatatccactgaggatttgaaccgtatagcagct
tatgccgctaaagaagagtttttgaaagaattggaaaatgctgaaagagagcgtgggttt
ttagaatacgtttctcaggagggcaatattgtacatggtatagtaagagaaataaccaaa
gaccagaccgctattgtggatttaggccctatagatgctgagcttccaaggaaagaacaa
atcccaaaagaaagtttcaaaaaaaacgatagagtgaaagcgcttcttttttcagtgcaa
aaagaaagaggtagaccagttttgttgctttccagaacacaccctaagtttttaagaagg
cttttagaagctgagataccagaagtagcaagtgggcttgtgaaaatagtttctgttgca
agggaaccaggtgaaaaggctaaggttgtggttgatacagaagataaaaagattgaccca
gtaggtgtggttataggcataaaaggttcaaaaataaaccccatatctaaagagcttgct
ggagagcatatagatgttgtaagatactctgaggataaaaagaagtttttagaaaatttg
ttttttccagctaaaatccttgatataagggaatcaggcaatcaaatagaggtggctgtt
gacaaagatcaagtttctttagccatagggaaaagaggtataaacacaaagctagcttat
aaaatactgggtaaacatatagatgtgatgtcaaaagaagattttgataagctaaagaag
ctttcctga
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