Hyphobacterium sp. CCMP332: HXX25_01875
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Entry
HXX25_01875 CDS
T06775
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hyt
Hyphobacterium sp. CCMP332
Pathway
hyt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HXX25_01875 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyt03400
]
HXX25_01875 (uvrB)
DNA repair and recombination proteins [BR:
hyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HXX25_01875 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HXX25_01875 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
AAA_22
UB2H
DUF87
TrwB_AAD_bind
CwsA
AAA_5
AAA_7
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
QNL18192
LinkDB
All DBs
Position
complement(361029..363185)
Genome browser
AA seq
718 aa
AA seq
DB search
MARLTTDDSAVRDMGQAKFEIESPVPTPAAWVPHRPARPEKSEGGVRFECVSEYSPTGDQ
PSAISELVHGLNAQERDQVLLGATGTGKTFTMAKIIEAVQRPALILAPNKTLAAQLYGEF
KSFFPRNAVEYFVSYYDYYMPEAYVPRTDTYIEKESSINEAIDRMRHAATRSILERDDVI
IIASVSCIYGIGSVETYTAMTFELKTGATADPREVAKKLVALQYTRNDAAFQRGTFRLRG
DVLEIFPAHYDDRAWRVDFFGDEVERITEFDPLTGRAQTELNSVKIYANSHYVTPRPTLH
QAMASIKEELKVRLAWMEQNGKLLEAQRLAQRTEFDLEMIGATGSCAGIENYSRYLTGRK
PGEPPPTLFEYIPEDALVFVDESHQTIPQLGAMFKGDFSRKKTLADHGFRLPSCLDNRPL
KFEEWDLMRPQTVCVSATPGGWELQRTGGVFTEQVIRPTGLVDPPVEVRPVSKDGASQVD
DIIDEARATAANGFRTLVTTLTKRMAEDLTEYMHEQGLKVRYMHSDVDTVERIELIRDLR
LGVYDVLVGINLLREGLDIPECGLVGILDADKEGFLRSETSMVQTIGRAARNADAKVILY
ADKITSSMQRAMDETERRREKQHAHNIEHNITPTSIVRGISDVLEGVMEKTAAGRSGRTR
GRSQRRETKAAENQVAFEPNNLRAVVADLEKQMREAAANLEFETAAELRDQIKQLEGE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcccgactcaccactgatgacagtgccgtccgcgatatggggcaggcgaaattcgaa
atcgaaagtccggtgccgacgcccgctgcctgggtgccgcaccgccctgcccgtccggag
aaatcggagggcggagtccggttcgaatgtgtctcggaatattcgccgaccggagaccag
ccctcggcgatttccgaacttgtccacggtctcaatgcgcaggagagagaccaggtactc
ctcggggcgacggggacgggcaagaccttcaccatggcgaaaatcattgaagcggtgcag
cgcccggcgctgatcctggcgccgaacaagacgctggcggcgcagttatacggcgaattc
aagagcttttttccccgtaatgccgtcgagtattttgtctcctactacgactactacatg
cccgaagcctatgtgccgcgcaccgacacgtacattgagaaagagtcttcgatcaatgag
gcgattgataggatgcgccacgccgccacccgttccatcctggagcgggatgatgtgatc
attatcgcctccgtctcctgcatttacggcatcggctcggtcgagacctatacggcgatg
acgttcgagctgaagaccggcgccaccgccgatccgcgcgaggtcgcgaagaaactcgtc
gccctgcaatacacgcgcaatgacgcggctttccagcgcggcaccttccgcctgaggggc
gatgtgctggaaatcttcccggcgcattatgacgaccgggcctggcgcgtggatttcttt
ggtgacgaggtcgagcgcatcaccgaattcgacccgctgaccgggcgcgcccagaccgag
ctcaattcggtcaagatctacgccaattcgcactatgtgacgccgcgcccgacgctgcat
caggccatggcctccatcaaggaggagctgaaagtccgcctcgcctggatggagcaaaac
ggcaagctgctcgaagcgcaacgcctcgcccagcgcacggaatttgatctggaaatgatc
ggcgcgacgggctcgtgcgccggcatcgagaattattcgcgctacctcaccggccgcaag
ccgggcgagccgccgcccacattgtttgaatatatcccggaggatgccctcgtctttgtc
gatgagagccaccagacgattccgcagctgggcgccatgttcaagggcgacttcagccgc
aagaaaacgctggccgatcacggctttcgcctgccctcctgcctcgataaccgcccgctg
aaattcgaggaatgggacctcatgcggccgcagaccgtctgtgtctcggcgacgcccggc
ggctgggaattgcagcgcacgggcggcgtcttcaccgaacaggtcatccgccccaccggg
ctggtcgatccgccggtcgaggtccgcccggtgtcgaaggacggggccagccaggtcgat
gacattatcgatgaagcccgcgccacggcggccaatggcttccgcaccctggtcaccacc
ctcaccaagcgcatggccgaggatctcaccgaatacatgcacgagcaggggctgaaagtc
cgctacatgcactccgatgtcgacacggtggagcgtatcgagctgatccgcgacttacgt
ctcggcgtctatgatgtgctggtcggcatcaaccttttgcgcgaaggcctcgatatcccc
gaatgtggccttgtgggcattcttgatgcggataaggaaggctttctgcgctctgaaacc
agcatggtgcagacgattggccgcgcggcgcgcaatgcggatgcgaaagtcatcctctat
gccgacaagatcaccagttccatgcagcgcgcgatggatgagaccgaacgtcgccgcgaa
aaacaacacgcccacaatatcgaacacaacattacgccgacctcgattgtgcgcggcatt
tcagatgtgctcgaaggcgtcatggaaaaaaccgccgccggtcggtcagggcggacacgt
ggcaggtcgcaaagacgggaaaccaaggccgccgaaaatcaggtggcgttcgaaccgaat
aatctgcgcgccgtggtcgctgatctggaaaaacagatgcgggaggccgcggcgaatctg
gagtttgaaaccgctgcggagctgcgcgatcagatcaagcagttggagggggagtag
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