Hyphobacterium sp. CCMP332: HXX25_02320
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Entry
HXX25_02320 CDS
T06775
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hyt
Hyphobacterium sp. CCMP332
Pathway
hyt03420
Nucleotide excision repair
hyt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HXX25_02320
03430 Mismatch repair
HXX25_02320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyt03400
]
HXX25_02320
Enzymes [BR:
hyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HXX25_02320
DNA repair and recombination proteins [BR:
hyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HXX25_02320
MMR (mismatch excision repair)
Other MMR factors
HXX25_02320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DUF3553
DEAD
Motif
Other DBs
NCBI-ProteinID:
QNL18270
LinkDB
All DBs
Position
complement(459389..461686)
Genome browser
AA seq
765 aa
AA seq
DB search
MSSLPISQQARPQPPRRDADYMEGLNPEQREAVEAINGPVLVLAGAGTGKTRVLTTRLAH
ILATGHAQPWQILSVTFTNKAAREMKERVGKLIGEAVEGLPWLGTFHSIAAQILRRHAEL
VELKSSFTILDTDDQLRLMKQLIQAEGIDEKRWTPRYLGSLIDGWKNRGLTPDKLPEDAK
YKFADGAGQKLYEAYQTRLRILNACDFGDLLLHNLTIFMNHPDVLKEYHRKFRYLLVDEY
QDTNVCQYLWLRLLAQGSHNLCCVGDDDQSIYGWRGAEVDNILRFETDFPGAKVVRLERN
YRSTANILGAASGLITANKSRLGKTLWTEDEPGEKVQVRGIWDGEAEARFVGDEIESWVN
SGRQHGESAVLVRASWQMRAFEDRFLMLGIPYKVIGGPRFFERAEIRDAHAYFRLVRSID
DDLAFERIVNTPKRGIGATSVQKVAHAARSAGLSLAAAARLMTETDEIRGGAKTGLKTFL
RDIDRWAQAADTMRHDELAEIILDESGYTAMWREDKSPQAAGKLDNLKELVRSMGEFDTL
EAYLEHVSLVAELDTTSGGDEVSLMTLHAAKGLEFPLVFLPGWEETVFPSQRSLDEGGTS
ALEEERRLAYVGITRARERAVISFTANRMIFGRWQAVIPSRFVDEMPADNVEAVSDTGYY
DSGPGFEGVKEQADPFISTYSSPGWKRYQAATGAGRKGGPAVIEGRANFVETSSAGSGKW
KAGDRVFHDKFGYGTVARADGAKLTVSFDKAGEKKVVDSFVRGEP
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgagctcacttcccatttcccagcaagcccgcccgcagccgccccggcgagatgccgac
tatatggaagggctgaatccggagcagcgcgaagccgttgaggcaatcaacggaccggtt
ctggtgctggccggtgcgggcacgggcaagacgcgcgttctgaccacccggctggcgcat
atattggcgaccggacatgcgcagccgtggcaaatcctgtcagtgaccttcaccaacaag
gccgcacgggagatgaaggagcgcgtcggcaagctgattggcgaagcggtggaaggcttg
ccgtggctgggcacgttccactccatcgctgcgcaaatcctgcggcgtcatgccgagctg
gtggaactgaaatcctccttcacgattctggatacagacgaccaattgcgcctgatgaaa
caactcattcaggccgaaggcattgacgagaaacgctggacgccgcgctatctgggctcg
ctgatcgatggctggaaaaatcgcggactgacgccggacaagctgcccgaagatgcaaag
tacaaatttgccgatggggccggtcagaaactatatgaggcctatcagacgcggcttcgc
attctgaatgcctgtgattttggcgatctgctgctgcacaatctgaccatctttatgaac
catccggacgttctgaaagagtatcatcggaagtttcgctatctgctggtggacgagtat
caggataccaatgtctgccagtatctgtggcttcgcttgctggcgcagggctcgcataat
ctgtgctgtgtgggcgatgatgatcagtccatctatggctggcgcggggcggaggtggat
aacatcctgcgtttcgagaccgattttccgggcgcgaaagtggtgcggctggaacgcaat
taccgctcgaccgccaatattctgggcgcggcctccggcctgatcacggcgaacaagtcg
cgcctcggcaagacgttgtggaccgaggatgaacccggcgaaaaggttcaggtgcgcggc
atctgggatggcgaggcggaagcccgctttgtcggagacgaaatagaaagctgggtcaat
tccggccggcagcatggggaatccgccgtactggtccgggcctcatggcagatgcgggcg
tttgaagaccgctttttgatgctgggcataccctacaaggtgattggtggaccacgcttc
ttcgagcgcgccgaaatccgcgatgcccatgcctatttccggctggtgcgctcgattgat
gatgatctggcgttcgagcggatcgtgaatacgcccaagcgcggcatcggcgcgacctcg
gtgcagaaagtcgcccatgcggcccggtcggcgggcctgtcgttggcggccgcggcgcgc
ctgatgaccgagaccgatgaaatccggggcggggcgaagacggggttgaaaaccttcctg
cgcgatattgatcgctgggcgcaagcggccgacacgatgcgccatgacgagctggccgag
atcattctcgatgaaagcggctacaccgccatgtggcgcgaggacaaatccccgcaagcc
gccgggaagctcgacaatctgaaagaactcgtccgctccatgggcgagtttgacacgctg
gaagcctatctggagcatgtctcactggtggctgaactggatacgacatcgggcggagac
gaggtctccctgatgacgctgcacgcggccaaagggctggaattcccgctcgtttttctt
ccgggctgggaagagacggtcttcccctcgcaacgctctctggatgaaggcggcaccagc
gcgctggaagaagaacggcgtctcgcctatgtcggcattacgcgggcgcgcgaacgcgcc
gtcatttcctttaccgccaaccggatgatctttggccgatggcaggccgtcatcccgtca
cgctttgtcgatgaaatgccggccgataatgtcgaggcggtgtccgacaccggctattat
gactcagggccgggctttgagggtgtgaaggaacaggccgacccgttcatctcgacctat
tcctcacccggctggaagcgctatcaggctgcgaccggtgccggccgcaagggcggaccg
gcggtgatcgaaggccgcgccaattttgttgaaaccagttctgccggttcgggcaaatgg
aaagccggtgaccgggtttttcatgacaagttcggctatggcaccgtcgcccgcgccgat
ggcgccaaactcaccgtctccttcgacaaggcgggcgaaaagaaagtggtggacagtttt
gtgaggggcgagccgtga
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