Hyphobacterium sp. CCMP332: HXX25_03695
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Entry
HXX25_03695 CDS
T06775
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
hyt
Hyphobacterium sp. CCMP332
Brite
KEGG Orthology (KO) [BR:
hyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyt03021
]
HXX25_03695
Transcription machinery [BR:
hyt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HXX25_03695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
Sigma70_ECF
HTH_28
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QNL18517
LinkDB
All DBs
Position
717210..717758
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AA seq
182 aa
AA seq
DB search
MSRGASDEELIALVVAARDGAAFGELVRRHQGVVRGMMTRMCGNHALADDLAQEAFIKAF
NKINSYTGSGSFRGWLCRIAYNEFLMSARKRKATDKAMERFKQDVDDVEKPRDMGSVVDL
DRGLKTLKEDERVCVVLCYASGMSHAEASEATGMPLGTVKSHVNRGREKLKAWFEAEEAM
VS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcggggcgcatcggacgaggaattgatcgcattggtcgtcgccgccagggacggc
gcggcctttggcgagctcgtccgccggcaccagggcgttgtgcgagggatgatgacccgc
atgtgtggcaatcacgccctcgcagacgatctggctcaggaagccttcatcaaggctttt
aacaagatcaacagctatacgggcagtggatcctttcggggatggctctgccggatagcc
tacaacgaatttctgatgtccgcgcgaaagcgcaaggcaacagacaaggccatggaacgc
ttcaagcaggatgtcgatgatgtcgagaagccgcgtgacatgggatcggtggtcgatctc
gaccgcggattgaaaacactgaaggaagacgaacgggtgtgtgttgtgctgtgttatgcg
agcggaatgtctcatgccgaggcatcggaagcgacgggcatgcctctgggaaccgtgaag
tcacacgttaaccggggacgggaaaagctgaaggcctggttcgaggccgaggaggcgatg
gtatcatga
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