Hyphobacterium sp. CCMP332: HXX25_03940
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Entry
HXX25_03940 CDS
T06775
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hyt
Hyphobacterium sp. CCMP332
Brite
KEGG Orthology (KO) [BR:
hyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyt03016
]
HXX25_03940 (rnd)
Enzymes [BR:
hyt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HXX25_03940 (rnd)
Transfer RNA biogenesis [BR:
hyt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HXX25_03940 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QNL18565
UniProt:
A0A7G8ZII0
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All DBs
Position
complement(761492..762643)
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AA seq
383 aa
AA seq
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MKLITTNQELEAACDALVQCDFIAVDTEFIRESTFWPQLCLIQAAGGKTEVLIDPLAEGI
DLEPFYDVLADDRIMKVFHAPRQDLEIFYHMADGMIPAPIFDSQVAAMALGLGDSIAYDK
LVMALLKHPIDKGSRFTDWARRPLTPAQSGYALADVTHLRDMYPILRDRLEKAGRISWVA
EEMAILTNPATYEQHPENAWQRLKVRKNSPKWLAGLKAAAAWREEEAQTRDIPRQRIVKD
EGLYEIAHAAPTKPDDLTGMRALPRGFERSAPAQRLIEKLAPALADPKAYAPDVPPPPRR
PEGASAIVELLKVLLKLVAEEADVASRLIATVPDLEAIATSDTADVPALKGWRRELFGEA
ALALKHGKIGLVLEKGKVVGKRL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgattacaacgaaccaggaactcgaggccgcgtgtgatgcgctggtgcaatgt
gacttcattgcagtggacaccgaattcatacgcgaaagcaccttctggccccagctctgc
ctgatccaggcggccggcggcaaaaccgaagtgctcatcgatcccctcgccgaggggatt
gatctggagcccttctacgacgttctggcggacgaccggatcatgaaggtcttccacgcg
ccgcgtcaggatctggaaattttctatcacatggctgacgggatgatcccggcaccgatt
ttcgacagccaggtcgccgcaatggcgctcggactcggcgattcaattgcctatgacaag
ctggtcatggcgctgctgaagcatccgatcgacaagggttcgcggtttaccgactgggcg
cggcgtccgctgacaccggcgcaatcgggctatgcgctcgccgatgtgacgcatttgcgc
gacatgtatccgatcctgcgcgaccggctggaaaaggccggacggatcagctgggtggcc
gaggaaatggcgatcctgaccaatccggcgacttatgaacagcatccggaaaatgcctgg
caacggctgaaggttcgcaagaatagtcctaaatggctggccgggctgaaagcggctgcg
gcctggcgcgaggaagaggcgcagacccgcgacattccacgacagcgcatcgtcaaggat
gaaggcctctatgagatcgctcatgcggccccgaccaagcccgacgatcttacaggcatg
cgcgctttgccgcgcggcttcgagcgctcggccccggcccagcgcctgatcgaaaagctg
gccccggcgctggccgatccgaaagcctatgcgccggatgtgccgccaccgccccggcgt
cccgaaggtgccagcgcgatcgttgaattgctgaaagtcctgctgaaactggttgccgaa
gaggccgatgtggcgtcacggctgattgctacggtgcccgatctggaagcgatcgccacc
agcgacaccgccgatgttccggcgctgaagggctggcggcgcgagctgtttggcgaggcg
gccctcgccctcaagcacggcaagatcgggctggttctggaaaaaggcaaggtcgtcgga
aagcggctctaa
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