Hyphobacterium sp. CCMP332: HXX25_04925
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Entry
HXX25_04925 CDS
T06775
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hyt
Hyphobacterium sp. CCMP332
Brite
KEGG Orthology (KO) [BR:
hyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyt03400
]
HXX25_04925
Enzymes [BR:
hyt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HXX25_04925
DNA repair and recombination proteins [BR:
hyt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HXX25_04925
Prokaryotic type
HXX25_04925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QNL18747
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All DBs
Position
976332..977783
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AA seq
483 aa
AA seq
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MSSNLTAPIIVWFRQDLRLADNPALEAAANSGHPVIPVYILDDETPGDWKMGGASRWWLH
HSLNALAGQLEDLGSQLILRRGPADQVLAELVEDTGTNGIFWNRCYEPFHRERDAKIKST
FSDKGLTVSSFNANLLAEPWTVKNKSGGPFKVFSPFWRSVRSELQPDAPLKAPDDLTPPQ
SWPASDELRGWALLPKHPDWAKGFEKIWTPGEAGALDRLKEFVENGAKHYAEGRDRPDKT
FTSGLSPHLHFGEISPRQILAITESCRESIGDRNAEKFFSEIGWREFSYSLLFNYPDLPH
ENYQKKFDHFPWREDPEALTAWQRGQTGYPIVDAGMRELWTTGVMHNRVRMIAASFLIKH
LMIDWRKGEKWFWDTLVDADLANNSASWQWVAGSGADAAPYFRIFNPITQGEKFDPDGDY
VRKWVPEIARLPNKYLNQPWEAGPLILKEAGIQLGKTYPEPIVDHKAARERALDAFKSLK
ETA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctccaatttgactgccccgatcatcgtctggttccgtcaggatttgcggcttgcg
gacaatccggcgctggaggcagcggccaattccggtcaccccgtcatccctgtctacata
ctcgatgatgaaacgcccggagactggaaaatgggaggtgccagccgttggtggctgcac
cacagcctgaatgcacttgccggccagctggaagacctcggatcgcaattgatccttcgc
cgcggcccagccgaccaggttttggcggagcttgtcgaggacaccggcacaaacggtatt
ttctggaaccgttgctacgagccctttcatcgcgaacgggacgcaaaaatcaaatccact
ttctcagacaaaggccttacggtcagctcgttcaatgccaatcttctggcagagccctgg
acggtcaaaaacaagtccggcggacccttcaaggtgttctcacccttctggcgttcggtg
cgaagcgaactgcaaccggatgccccgctgaaagcaccagacgatctgacgcctccgcaa
agctggccggcaagcgatgaacttagaggctgggctttgctgccaaaacatcccgattgg
gccaaaggtttcgaaaaaatatggactcctggcgaggccggagcgctcgatcgcctcaag
gagttcgtcgaaaacggcgcgaaacattatgccgaaggacgcgaccgcccggacaaaacc
tttacatcaggactgtcgccgcatctgcattttggtgaaatcagccctcgccagatcctc
gccatcaccgagagctgccgcgaatccattggcgatcgtaatgccgagaaattcttcagc
gaaatcggctggagggagttctcctacagccttctcttcaactatccggatctgccacac
gaaaactatcaaaagaagtttgatcactttccctggcgcgaggatccggaggccctgacc
gcatggcagcgtggacagaccggctaccccatcgtcgacgccggcatgcgcgagctctgg
accacgggtgtcatgcacaaccgcgtccgcatgatcgcggcttcctttctgatcaagcat
ttgatgattgactggcgcaaaggcgaaaaatggttctgggatacgttggtcgatgccgat
ctcgcgaacaattccgcaagttggcaatgggtcgcgggttcaggagccgatgccgcaccc
tatttcagaattttcaatcccatcacccagggcgaaaaattcgacccggacggagattat
gtccggaaatgggtgcctgaaatcgctcgcctgcccaacaaatatctcaatcagccatgg
gaggccggccccctcattttgaaggaagccggtatccaactcggcaaaacctaccctgaa
ccgattgttgatcacaaagccgctcgagagcgcgcgctggacgcattcaagagcttgaag
gaaaccgcatga
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