Hyphobacterium sp. CCMP332: HXX25_05780
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Entry
HXX25_05780 CDS
T06775
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hyt
Hyphobacterium sp. CCMP332
Brite
KEGG Orthology (KO) [BR:
hyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyt03032
]
HXX25_05780 (topA)
03400 DNA repair and recombination proteins [BR:
hyt03400
]
HXX25_05780 (topA)
Enzymes [BR:
hyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HXX25_05780 (topA)
DNA replication proteins [BR:
hyt03032
]
Prokaryotic type
DNA Topoisomerases
HXX25_05780 (topA)
DNA repair and recombination proteins [BR:
hyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HXX25_05780 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QNL18899
UniProt:
A0A7G8ZJG4
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All DBs
Position
1161572..1164145
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AA seq
857 aa
AA seq
DB search
MNVVVVESPAKAKTIEKYLGKDFQVFASFGHVRDLPAKDGSVKPDEDFEMTWEVDAQSQK
RVKAIADAVKGADRLVLATDPDREGEAISWHLLEALTKRRVLKDVEVQRVAFNAITKTAI
LEAMKHPRAVDMELVEAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRIVCDR
ELEIEKFRSEEYWTVDADMVSGGSQPFRARMVQFDGQKLGKLSIKDRAMATAAAEAIKAA
DLTIGAVEAKPAKRNPGPPFTTSTLQQEASRKLGFNAQRTMRTAQKLYEGVNIGGETVGL
ITYMRTDGVDMAPEAISQVRDVISSRYGSLYSPSSPRIYKSKQRNAQEAHEAIRPTSFSR
APEDLHLDEDQRRLYELIWKRAVASQMESARFERTTIDIQDSNKTLALRATGSVLLFDGF
LTLYQEGRDDEDEEGETRLPKVSSGAAAEAKKTHADQHFTQPPPRYTEASLVKRLEELGI
GRPSTYASTLSVLREREYVRMDKNRFIPEDKGRVVTAFLEKFFERYVEYDFTASLEDQLD
RVSRGDLDWKALLRDFWTGFSGDVEKIGDLRIGEVLEALNEALAPHIFPEKEDGSDPRLC
PSCNKGRLSIRLGKFGAFLGCDNYPDCKFTRPLGATEDNGMAEGDGALGEDPASGETVYL
KDGRFGPYVELALPGEEKPKRSSIPKGWSKDELDLEKALKLLSLPRTVGAHPEDGEIIEA
GLGRYGPFVKHGRLYANLPNIEEVFEIGLNRAVTVLAEKKATRGAPQALKELGEHEGEPV
RVMSGRYGPYIKYKKINATLPKGTDPETIDLETAMKLVAEKEAKGGKKPARKKAPAKKKP
AAKKKAPAKKKAAPKKA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcgttgtcgtcgaatcgcctgccaaagccaaaaccatcgaaaagtatctggga
aaagactttcaggtctttgccagcttcggtcatgtccgcgatttgcctgcaaaggacggg
tccgtaaaacccgacgaagatttcgaaatgacgtgggaagttgatgcgcaatcccaaaaa
cgcgtcaaggccatagcggatgctgtcaaaggcgcggatcgcctcgttctggcgactgac
ccggatcgcgaaggcgaagccatttcatggcacttgctggaggcgctgaccaagcgccgc
gtcctgaaagatgtcgaagtccagcgcgtggcgttcaacgccattaccaagacggccatt
ctggaggccatgaagcatccccgtgccgtggatatggaattggtggaagcctatctcgcg
cggcgggcgctggattatctggtgggcttcaccttgtcgcccgtgctctggcgcaaactg
cccggcgcgcggtccgccggtcgcgtgcaatcggtggcactgcgcattgtttgtgatcgc
gaactggaaatcgaaaaattccgctctgaagaatactggaccgtagatgcggatatggtc
tccggcggcagccagcccttccgtgcaaggatggtccagttcgacggccagaagctgggc
aaactgtcgatcaaggatcgcgccatggcgactgcggcagccgaagccatcaaggccgct
gacctgacaatcggagccgtggaagccaaaccggccaagcgaaatcccggaccaccattc
acgacatcgaccctgcagcaggaagcctcgcgtaagcttggcttcaatgcgcaacgcacc
atgcgaacagcgcaaaagctctatgagggcgttaatattggcggcgagaccgtaggcctc
atcacctatatgcggacggacggcgtcgatatggcgcccgaagccatttctcaggttcgc
gacgtgatcagcagccgctatggcagcctctattccccctcttcgccgcgtatctacaag
tccaagcagcgcaatgcccaggaagcgcacgaggcgatccgcccgacaagtttttcgcgg
gcaccggaagatttgcacctcgatgaggatcagcgccgcctgtacgaactcatctggaag
cgcgcggtcgccagtcagatggaaagcgcccgtttcgagcgcaccacgatcgacatccag
gacagcaacaagacgctggcgctcagagcgaccggttcggtcttgttgtttgacggcttc
ctgaccctgtatcaggaaggccgcgatgatgaagacgaggaaggcgaaacccggctaccc
aaagtctccagcggtgccgctgcggaagcgaaaaagacccacgcagaccagcacttcacc
cagccgccaccgcgctacaccgaagcgtctctggtcaaacggctggaagagctcggcatt
ggccgcccgtcgacctatgcctccaccctgtctgttctgcgagagcgggaatatgtccgc
atggacaagaaccgcttcattcccgaagacaagggccgcgtagtcaccgccttcctcgaa
aaattcttcgagcgctatgtcgaatatgattttaccgccagtctcgaagaccaactcgac
cgcgtgtcgcgcggcgatctcgactggaaggctttgctccgcgatttctggacgggcttc
tccggcgatgtcgaaaaaatcggtgatttgcgcatcggcgaggtactggaagcgctcaac
gaagcattggcgccccacatcttcccggaaaaggaagacggttcggatccgcgtctttgc
ccgtcctgcaacaagggacggctgtcgattcggttgggcaaattcggtgccttcctcggc
tgcgacaattacccggactgcaaattcacccgcccccttggcgcaacggaagacaacggc
atggccgagggcgatggcgcgctcggtgaggatccggccagcggagaaaccgtttatctg
aaggacggtcgctttggcccctatgtcgaactggctttgccaggggaggaaaagcccaag
cgttcctccatcccgaaaggctggtcgaaagacgaactcgatctggaaaaggcgctgaag
cttctgtcactcccgcgcactgtgggcgcgcacccggaagatggcgagatcatcgaagcc
ggactgggccgctacggaccttttgtgaagcatggccgcctctatgcaaacctgcccaat
atcgaagaagtctttgaaatcggcctcaatcgcgcggtaacggttctggccgagaaaaag
gccacgcgcggcgcaccgcaagccctgaaggagctgggtgagcatgagggtgagccggtt
cgcgtgatgagcggccgttatggcccctacatcaagtacaagaaaatcaacgccacactg
ccgaaaggtaccgatccggaaacaatcgatctggaaacagcgatgaagctggtggcagaa
aaagaagccaagggcggcaagaaaccggctcgcaaaaaggccccggccaagaaaaaaccg
gccgccaaaaagaaggctccggcaaagaaaaaggcggcaccgaagaaagcgtga
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