Hyphobacterium sp. CCMP332: HXX25_05875
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Entry
HXX25_05875 CDS
T06775
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hyt
Hyphobacterium sp. CCMP332
Pathway
hyt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HXX25_05875 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyt03019
]
HXX25_05875 (recQ)
03400 DNA repair and recombination proteins [BR:
hyt03400
]
HXX25_05875 (recQ)
Enzymes [BR:
hyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HXX25_05875 (recQ)
Messenger RNA biogenesis [BR:
hyt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HXX25_05875 (recQ)
DNA repair and recombination proteins [BR:
hyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HXX25_05875 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
AAA_22
HHH
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QNL18914
UniProt:
A0A7G8ZJH9
LinkDB
All DBs
Position
complement(1180353..1182155)
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AA seq
600 aa
AA seq
DB search
MTVSAHSVLKSVFGFPEFRPGQIQIVERLLEGKHTLCVMPTGAGKSLCYQVPALMRDHPS
IIISPLVALMDDQVAGLVANGVAAVAIHSGRSREENVAAWRAFQSGEAKLLYLSPERLMT
PRMLDALKSVEPGLFVVDEAHCISKWGASFRREYEQLSQLKHHFPNATLAAFTATADSAT
RADITEKLFNGEGETIVRGFDRPNLNLSVTPKLQWKSQILEFLAERREQSGIVYCLSRKL
TGEVVDLLKAEGYRALPYHAGMSPEMRRENQEVFMAEDAVVMVATIAFGMGIDKPDIRYV
FHLNMPGSMEAYYQEIGRAGRDGAPADAMLLYGMGDAGLRRRFIDGDGEDEGHKRREHQR
LDALLAYCEATQCRRITLLSYFGEPGAKACGNCDICLDPPVLLDGTREAQMLFSAILRTG
QSFGSGHVVDVLRGGDTDKVRARGHDALPTYGIGKDRPKAFWQGLIRQAVAGGYLKSDID
QFGVLKLTDRGDAVLRGRETFELREIVIGKGERKPRRTRASKAGESDVDSGLLAALKNLR
RELAAERNVPAYVIFSDATLIDMCHLRPENLEQMAAVNGVGPKKLADLGEVFLAALRAQT
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgtccgctcattctgtcctgaagtccgtgttcgggtttcccgaattccggccc
ggccagatacagatcgtggagcgattgctggaaggcaagcatacgctgtgcgtcatgccg
accggggcgggtaaatcgctctgctatcaggtgcccgccctgatgcgggaccacccctcg
atcattatctcgccgctggtggcgttgatggatgatcaggttgccgggctggtggcaaac
ggagtggccgcggtggcgatccattccgggcgcagccgcgaggaaaatgtcgctgcctgg
cgggcgtttcagtcgggagaggcaaagctcctttatctttcgccggagcgattgatgacg
ccacgtatgctggatgcgctcaaatcggtcgagccgggcctgtttgtcgtcgatgaagcc
cattgtatttccaagtggggtgccagtttccggcgtgaatacgagcagctttcgcaactc
aaacatcatttccccaatgcgacactggcggcatttacggccacagctgatagtgccacg
cgcgctgacatcaccgaaaaactgttcaacggtgaaggcgaaaccatcgtgcgcggcttc
gaccgccccaatctcaacctctccgttacgccgaaactccagtggaagtctcaaattctc
gaatttctggcggagcgcagggaacagtccggcattgtctattgcctgtcgcgcaaactg
acgggagaggttgtggacctgctcaaggccgaaggctaccgggcactgccctatcatgcc
gggatgtcgccagaaatgcggcgtgagaatcaggaagttttcatggccgaggacgcggtt
gttatggtggcgacgatcgcgttcgggatggggatcgacaagccggatatccgctatgtc
ttccatctgaacatgcccggctccatggaggcctattatcaggagattggccgggccggc
cgcgacggtgcgcccgccgacgcgatgctgctgtacggcatgggcgatgccgggctgcgc
cggcgtttcattgatggcgacggtgaggatgaggggcataagcggcgcgagcatcagcgc
cttgatgcgcttctggcctattgcgaagcaacccagtgtcggcgcatcacgctgttatcc
tatttcggcgagccgggtgcgaaggcatgtggaaattgcgatatttgcctcgacccgccg
gttcttctggatgggacacgcgaagcgcaaatgctgttttccgccattctccggaccggc
cagtccttcggatctggccatgttgtcgatgtgctgaggggcggagatacggacaaggtc
cgggcgcgcgggcatgatgctttaccaacttatggcattggcaaggatcggccgaaggcc
ttctggcaaggcttgatccggcaagcggtcgccggcggatatctgaaatccgatatcgat
cagtttggtgtcctcaagctcacggatcgtggcgatgctgtgttgcgcggccgcgagacg
tttgagctgcgagagatcgtcattggcaaaggcgagcggaagccccgccgtacccgcgcg
agcaaggcgggcgagagcgacgttgattccggattgctggccgcactcaagaatttacgc
cgcgagctggctgcggaacgcaatgtgcccgcctatgtcatattttccgatgcgaccctg
attgatatgtgccatttgcggcctgaaaatctggagcagatggccgcggtcaacggggtc
ggaccgaagaagctggccgatcttggcgaagtctttctggcggcgctgcgcgcgcagacc
tag
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