Hyphobacterium sp. CCMP332: HXX25_07085
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Entry
HXX25_07085 CDS
T06775
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
hyt
Hyphobacterium sp. CCMP332
Brite
KEGG Orthology (KO) [BR:
hyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyt03032
]
HXX25_07085
03036 Chromosome and associated proteins [BR:
hyt03036
]
HXX25_07085
03400 DNA repair and recombination proteins [BR:
hyt03400
]
HXX25_07085
DNA replication proteins [BR:
hyt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HXX25_07085
Chromosome and associated proteins [BR:
hyt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HXX25_07085
DNA repair and recombination proteins [BR:
hyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HXX25_07085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF937
Motif
Other DBs
NCBI-ProteinID:
QNL19089
UniProt:
A0A7G8ZK04
LinkDB
All DBs
Position
complement(1389932..1390198)
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AA seq
88 aa
AA seq
DB search
MNKSDLAKAVADSTGMSKAQAGEAVDATIEAIVGAVKGKDNVQLAGFGTFYAKHREARQV
RNPRTGETMMSKAKTSAAFRPAAGLKDI
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcagatctcgccaaggctgtcgccgactccactggcatgtccaaggcacaa
gccggtgaagctgtcgatgctacgatcgaagccatcgttggtgccgtcaaaggcaaggac
aatgtccagctggccggtttcggcaccttctatgccaagcatcgtgaagctcgtcaggtt
cgcaatccgcgcaccggcgagacgatgatgtccaaagccaagacgtcggcggctttccgt
ccggcagctggcctgaaagacatctaa
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