Hyphobacterium sp. CCMP332: HXX25_08960
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Entry
HXX25_08960 CDS
T06775
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hyt
Hyphobacterium sp. CCMP332
Brite
KEGG Orthology (KO) [BR:
hyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyt03016
]
HXX25_08960 (truA)
Enzymes [BR:
hyt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HXX25_08960 (truA)
Transfer RNA biogenesis [BR:
hyt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HXX25_08960 (truA)
Prokaryotic type
HXX25_08960 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QNL19428
LinkDB
All DBs
Position
complement(1754446..1755183)
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AA seq
245 aa
AA seq
DB search
MPRYKLTLEYDGGPFMGWQRQDHGPSVQGSLERAATKLNGSPVEVHGAGRTDSGVHALGQ
VAHLDLDKDLPTDTVRDAINQHLRPEPIAVLSCEEVDEDFHARHSATKRHYIYRMIDRRP
PLTLDKGKIWRVTQKLDVDAMHSAAQCLVGTHDFSTFRDIQCQAKSPVKTLEKIAVRRVA
DEVELTCSAISFLHRQVRSITGSLVEIGRGKWAPEDLKAALEARDRAACGPVAPADGLYL
ERVDY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgttacaagctgacgctggaatatgatggcgggcccttcatgggctggcagcgg
caggatcacggacccagcgtgcagggcagtctggagcgtgccgcgacaaagctgaacgga
tcacccgtggaagttcacggggcggggcgcacggatagtggcgttcatgcgctggggcag
gtcgctcatctcgatctcgacaaggatttgccgaccgatacggtgcgcgatgccatcaac
cagcatttgcgtcccgagccgattgcggtcctgtcgtgcgaggaagtagacgaggatttc
cacgcccgtcattcggcgaccaagcgccattatatctatcgcatgatcgatcgccgcccg
ccgctgacgctggacaagggcaagatctggcgggtgacgcaaaagctggacgttgatgcc
atgcattccgccgcgcaatgcctcgtcgggacgcatgatttctcgacctttcgggatatc
cagtgccaggcgaaatcaccggtcaagacactggaaaagattgccgtccggcgggtggcg
gatgaggtcgagctgacctgttccgccatctccttcctgcatcggcaggtgcggtcgatc
accggttcgctggtggaaatcggccgcggaaaatgggccccggaggatctgaaagcggca
ctggaggcgcgtgatcgcgccgcctgtgggccggtcgcgcccgcggacggcctctatctg
gaacgggtggattactag
DBGET
integrated database retrieval system
