Hyphobacterium sp. CCMP332: HXX25_11170
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Entry
HXX25_11170 CDS
T06775
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hyt
Hyphobacterium sp. CCMP332
Brite
KEGG Orthology (KO) [BR:
hyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyt03016
]
HXX25_11170 (truB)
Enzymes [BR:
hyt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HXX25_11170 (truB)
Transfer RNA biogenesis [BR:
hyt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HXX25_11170 (truB)
Prokaryotic type
HXX25_11170 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QNL19835
LinkDB
All DBs
Position
complement(2220573..2221529)
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AA seq
318 aa
AA seq
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MGRRKKGQDVHGWVLLDKPLDMTSTQAVSAVRRLFDAKKAGHAGTLDPLATGMLPIALGE
ATKTVPLAQDATKTYRFTIRWGVSTDTLDAEGAETATSDVRPDAEAIRDALSDFVGDIEQ
IPPKYSAIKIDGERAYDLARAGAEVEIAARPVHIERLELIETPSPDEAVFEMDCGKGTYV
RAIARDLSAKLGTEGHIFRLRRTAVGVFEESAAISLDELADLAHKGRAFEGLAPVETALD
DIPALAVTGEEVSHLRQGRSIVLLPRIAQELRAQRRPRDLSGKDGSRMAVAMHGEMAVAL
GDAQAGKFVPSRVFNHSI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtcgcaagaaggggcaggatgttcatggctgggtcttgctcgacaagcctctg
gacatgacgtcgacgcaggcggtttctgcggtgcgccggttgttcgacgccaaaaaggcc
ggtcatgccggcacgcttgatccgctggcaaccggcatgctgccgattgcgctgggcgag
gccacaaaaaccgttccgcttgcccaggacgcgaccaagacctaccgcttcaccattcgc
tggggtgtatctaccgatacgctggatgccgagggcgcggagacggcaacgtccgatgtg
cggccggatgcagaggccattcgtgacgccttgtcagacttcgtaggtgacatcgaacag
attccgccaaaatactcggctatcaaaatcgatggcgagcgggcctatgatcttgcccgc
gccggggcggaggtggagatcgccgcgcggccggttcacatcgagcggctggagttgatc
gagacgccctcgcctgatgaggcggtcttcgaaatggattgcggcaaaggcacttacgtt
cgcgccattgcccgtgacctgtcggccaagcttggcacggaagggcatattttccgcctt
cgccggacagcggtcggcgtatttgaagagtctgctgccatatcgctggacgaattggca
gatttggcccataagggccgcgcttttgaggggcttgccccggttgagaccgcgctggac
gacatcccggcgctggccgtaaccggagaagaggtttctcatctgaggcaagggcggtcc
atcgtcctgctcccgcgcattgcgcaggagctccgtgcccaaaggcgtcctcgtgatctt
tccggaaaagacgggtctcgaatggcggtcgcgatgcacggcgagatggcggtcgctctc
ggagacgcacaggcgggaaaattcgttccgtcacgggtcttcaaccatagcatctag
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