Hyphobacterium sp. CCMP332: HXX25_12860
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Entry
HXX25_12860 CDS
T06775
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hyt
Hyphobacterium sp. CCMP332
Pathway
hyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HXX25_12860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyt03400
]
HXX25_12860
Enzymes [BR:
hyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HXX25_12860
DNA repair and recombination proteins [BR:
hyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HXX25_12860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Helicase_C
GpA_ATPase
HVO_A0114
AAA_16
ADDB_N
Zn_ribbon_PriA
Zn_ribbon_tTFIIB
DZR
Motif
Other DBs
NCBI-ProteinID:
QNL20142
LinkDB
All DBs
Position
2576689..2578878
Genome browser
AA seq
729 aa
AA seq
DB search
MSRTPPLKAKASILFPMPLPEPFDYAVPDGMELRIGDHVRAPLGKRSARGVVWALSSDDG
SRNLKSVESVYEAPPLSEAMIEFVNWSARYLVQWPGLVLRMVLRSEDSLMPSPTEIQFDA
AGDLPARMTEARTRVIEAVTEYGPNSAAELARLAGVTPGVVSGLAKAGGLVRIERPADPP
FDPPDPDGPGVDLVPQQAEAADQLKRMITAGGFQAALLDGVTGSGKTEVYFEAIAHSLRR
DPDAQILVLLPEIALTRAVTARFISRFNAEPALWHSDQGHKERRRIWREVNENRARIVIG
ARSALFLPFQNLRLIVVDEEHDATYKQGDGLHYQARDLAVVRARASQAPIVMASATPSIE
SLANARAGRYAYIQLPDRIGKAVLPEITTIDLREEPNRPARGMWLSNPLVEAMAETLARK
EQVLLYLNRRGYAPLVLCRDCGHKMKSPAVDAYLTEHRYTGRLICHLTGFSMLRPDKCPE
CGAIDSLTSVGPGVERVAEEARARFPDARIEILSSDTAHSAEKLLALIDRMERGEIDILV
GTQIAAKGHNFLNLTLIGVVDADLGLAGGDPRAGERTYQTLVQVAGRAGRADRPGRAFLQ
THDPEHDAIAALVAGDRDRFMETETMARELLGLPPYGRLAAIIISARDPSQADAVAREWA
RKAPNADGIQIWGPAEPRYGMVRGWHRRRMLIRADRDVDLSAWLWAWKKNMKPVSSVRVT
IDIEPYSFV
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcacgccccctctcaaagccaaggcctccatcctgtttcccatgcccttgccg
gaaccgttcgattatgcggtgccggacgggatggagctgcgtatcggcgaccatgttcgc
gcgccgctgggcaagcgctcggcgcgcggcgtcgtctgggcgctctcgtccgatgatggc
agccgcaatctcaaaagtgtcgagagcgtttatgaagccccgcccctctcggaggcgatg
atcgaatttgtaaactggtcagcgcgatacctggtgcaatggccggggctggtcctgcgc
atggtgttacgcagcgaggattcgctcatgccatcgcccaccgaaatccagtttgacgcg
gcgggagacctgcccgcgcgcatgaccgaggcgcgaacccgtgtcatcgaggccgtcacc
gaatatgggccgaattccgcggcggaactggcgcgtctggccggcgtgacgcccggcgtg
gtgtcggggctggccaaggccggcggtctggtgcggatcgagcgcccggcggacccgccg
ttcgatccgccggatccggacgggccgggcgtcgatctggtcccgcaacaggccgaggcc
gcggatcagctgaaacgcatgattactgccggcggctttcaggcggctttgctggatggc
gtgacgggttcgggcaagacggaagtctatttcgaggccatagcccattcgttgcgccga
gacccggatgcacagattctcgtccttctgcccgaaattgccctgacccgcgccgtgacc
gcgcgatttatatcgcgttttaacgccgaaccggcgctttggcattccgatcagggtcac
aaggaacgccgccgaatctggcgggaggtcaatgagaatcgcgcacggattgtcattggc
gcgcgctcggctctgttcctgcctttccagaatctgcgccttatcgtcgtcgatgaagaa
catgacgcgacctacaagcagggcgacggattgcattatcaggcgcgcgatctggcagtc
gtgcgggcacgggcctcgcaagcgcccatcgtcatggcgtcggccacgccctcgattgaa
agcctcgcgaatgcgcgggccgggcgctatgcctatatccagcttcccgaccgcatcggc
aaagcggttctgcccgaaatcacgaccatcgatcttcgcgaggaaccgaaccggcccgcg
agggggatgtggctttccaatcctctggtcgaggcgatggccgagacgctggcgcgcaag
gagcaggtgcttttgtacctgaatcggcgaggctatgcgccgctcgtcctgtgccgcgat
tgcggacacaagatgaaatcgcccgctgtcgacgcctatctgacagagcatcgttataca
ggacggctgatctgccatctcaccggcttttccatgctgcgccccgacaaatgcccggaa
tgcggggccattgattccctgaccagtgtcgggccgggcgtcgagcgagtggccgaagaa
gccagggcgcgttttcccgacgcgcgcatcgaaatcctctcctcagatacggctcactca
gccgagaaattgctggcgctgatcgaccgcatggagcgcggcgagattgatattctcgtc
ggcacacagattgccgccaagggccataacttcctcaacctcaccctcattggtgtcgtc
gatgccgatctgggtctggccggcggcgacccgcgcgccggcgaacgaacctatcagacg
ctggttcaggtcgcggggcgggcgggccgggctgatcgtccgggccgggcctttctgcaa
acccatgatccggaacatgatgccatcgccgcattggtcgccggtgaccgggatcgcttc
atggaaaccgaaaccatggcccgcgaactgctcggcctgccgccctatggccggctcgcg
gcgattatcatttcagccagagacccctcgcaagccgatgcggtggcgcgggaatgggcc
cgcaaggcgccgaacgccgacggcatccagatctggggaccggccgaaccgcgctatggc
atggtccggggctggcaccggcggcgcatgctgatccgcgcagatcgggatgtcgacctt
tccgcctggctctgggcctggaagaaaaacatgaaaccggtttcatcggtccgcgttaca
atagacattgaaccctacagttttgtctga
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