Hymenobacter weizhouensis: OIS53_04730
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Entry
OIS53_04730 CDS
T11506
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hyu Hymenobacter weizhouensis
Pathway
hyu03030
DNA replication
hyu03430
Mismatch repair
hyu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OIS53_04730
03430 Mismatch repair
OIS53_04730
03440 Homologous recombination
OIS53_04730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyu03032
]
OIS53_04730
03400 DNA repair and recombination proteins [BR:
hyu03400
]
OIS53_04730
Enzymes [BR:
hyu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OIS53_04730
DNA replication proteins [BR:
hyu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OIS53_04730
DNA repair and recombination proteins [BR:
hyu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OIS53_04730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
DUF7508
DUF7265
DUF3788
Motif
Other DBs
NCBI-ProteinID:
UYZ64153
LinkDB
All DBs
Position
1164449..1165942
Genome browser
AA seq
497 aa
AA seq
DB search
MYAIVDLETTGGQPTQDRITEIAIYIHDGEKVVDEFSTLLNPGRPIPFFITQLTGITDDM
VREAPKFHEVARKIVELTEGCVFVAHNVRFDYSFLKKEFADLGYNYSRKTLCTVRLSRSL
LPGQPSYSLGKLCQNIGIPLHDRHRAAGDAAATAILFGRLLGISQQAEDLAAPGRSPAET
LAAVDATAPAGRRPGAAVGEKLPSARKIKAVQEAIRTALLPPNITPEKMATLPQEAGVYY
FHNEQGEVIYVGKSINIYKRIQQHFAVDYKSRKSIEFKNSIADITWELTGSELVALLYES
HEIKRLKPLYNRAQRRSVFPAGIFLRTDEQGYKHLYYGRADDHAQSHPLIALGNQYKAKG
FLFHKVAKFNLCQKLCDLYKTNGSCFDYQVHRCKGACVGLEPPEEYNLRVEAAIESFTYE
HGSFVVIGPGRHATENSVVVVENGRYLGFGYVDESFSARRLGDFREVITRYNDNKDVQQI
IRQYLRTKHKDKVKVFQ
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgccatcgtcgaccttgaaacgaccgggggccagcccacccaggaccgcatcacc
gaaatagccatctacattcacgacggcgaaaaggtggtggatgagttcagcacgctgctc
aaccccggccgaccgattcccttctttatcacccagctcacgggcatcaccgacgacatg
gtgcgcgaggcacccaagtttcatgaggtggcccgcaagattgtggaactgacggagggc
tgcgtgtttgtggcgcacaacgtccggtttgactattcttttctgaaaaaggagtttgcc
gacctgggctacaactactcgcgcaaaaccttgtgcaccgtgcgcctgagccgctctttg
ctgccgggccagcccagctacagcctgggcaagctgtgccagaacatcggcattccgctg
cacgaccggcaccgcgccgccggcgacgctgccgccacggccattctgtttgggcgcttg
ctgggcatcagccagcaggctgaggacctggctgcccccggccgcagcccggccgaaact
ctggccgccgtggatgctacggcgccggccggccggcggcccggcgcggcggttggggaa
aagctgccctcggcgcgcaagattaaggccgtgcaggaggccatccggacggccctgctg
ccgcccaacatcacgcccgaaaagatggccacgctgccccaggaagccggcgtgtactac
ttccacaacgagcagggcgaggttatctacgtcggcaagagcatcaacatctacaagcgt
attcagcagcatttcgccgtcgattacaagtcccgcaagagcatcgagttcaagaactcc
attgccgatatcacctgggagctaaccggctccgagctggtggctttgctctacgagtcg
cacgaaatcaagcggctgaaacctttgtacaaccgggcccagcgccgctcggtgtttcca
gcgggcatcttcctgcgcaccgacgagcaaggctacaagcacctctactacggccgcgcc
gacgaccacgcccagtcgcacccgctgattgcgctgggcaaccagtacaaggccaagggc
ttcctgtttcataaggtggccaagttcaacctctgccagaagctgtgcgacctgtacaaa
accaacggctcctgcttcgactaccaggtgcaccgctgcaagggcgcctgcgtgggcctg
gagccgcccgaggagtataatctgcgggtggaggcggccattgagtcgtttacctatgag
cacggctcgtttgtggtcatcgggccgggccgacacgccaccgaaaatagcgtggtagta
gtggaaaacggccgctacctgggcttcggctacgtggacgagtccttttcggcccgccgc
ctgggcgacttccgcgaggttattacccgctacaacgacaacaaagatgtgcagcagatt
atccggcagtacctgcgcaccaagcacaaggataaagtgaaggtgtttcaatag
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