Hymenobacter weizhouensis: OIS53_14565
Help
Entry
OIS53_14565 CDS
T11506
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hyu Hymenobacter weizhouensis
Pathway
hyu03410
Base excision repair
hyu03430
Mismatch repair
hyu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OIS53_14565 (recJ)
03430 Mismatch repair
OIS53_14565 (recJ)
03440 Homologous recombination
OIS53_14565 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyu03400
]
OIS53_14565 (recJ)
DNA repair and recombination proteins [BR:
hyu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
OIS53_14565 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OIS53_14565 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OIS53_14565 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UYZ62213
LinkDB
All DBs
Position
complement(3470941..3472662)
Genome browser
AA seq
573 aa
AA seq
DB search
MEKRWIRKPTPDTEQIRHLADVLRVNEAIIALLCQRRVCTFEEARAYFRPDLSQLPDPLL
MRDMDRAVDRLVRALHLGERVLVFGDYDVDGTTSVALVYSYLRQYFGPERIDYYIPDRYK
EGYGVSEAGIDFASDFGYQLIIALDCGVKAVEKIAYANQRGVDFIICDHHLPGAELPQAV
AVLDPKRPDCQYPHKELSGCGVGFKLMQAFTQHQGLPEEVLYELLDLVAVSIAADIVPIT
GENRTLAYHGLRLLNDSSHPQRPGLDALRELAGIQNAELNISSLVFGFAPRINAAGRMGD
AKRSVAMLLADTTAEAVSTAGVVDKTNQERRGFDTSITKEALEMIEQDDLLRSARTTVLF
KQDWHKGVVGIVASRCLDKYYRPTIILTESNGKATGSARSVVGFDVHQAIEECADLLDQF
GGHMYAAGLTLPLENVPAFREKFERIVASRIQPEQLIPPVEIDWTLRLSDITLGFFNLLR
QMEPFGPGNPNPVFQSEQVYAAPDSARIVGNSHLKLALTQDGRHTIDAIGFGLGDYYTRI
RQGQPFSVCYTIEMNEFRGVRNLQLRVKDIRWE
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgatggattcgcaagcccacgcccgatacggagcaaatccggcacctggcc
gacgtgctgcgcgtgaacgaagccatcattgccctgctctgtcagcgccgcgtgtgcacg
tttgaagaggcccgcgcctacttccggcccgacctaagccaactgcccgacccactgctg
atgcgcgacatggaccgcgccgtagaccgcctcgtgcgggctctgcacctgggcgagcgg
gtgctggtgttcggtgactatgacgtggacggcactacctccgtggcgctagtgtacagc
tacctgcgccagtatttcgggccggagcgcatcgactactacatccccgaccgctacaaa
gaaggttacggcgtgtcggaggccgggattgacttcgcctccgacttcggctaccagctt
atcattgccctcgactgcggcgtaaaggccgtggagaagatagcctacgccaaccagcgc
ggcgtcgacttcatcatctgtgaccaccacttgcccggcgccgagctgccccaggccgta
gccgtgctcgaccccaagcgccccgactgtcagtacccgcacaaggagctgtcgggttgc
ggggtggggttcaagctgatgcaggcttttacccagcaccagggcctgcccgaggaggtc
ttgtatgagttgctggacttggtggccgtgagcattgccgccgacatcgtgcccatcacc
ggcgaaaaccgcaccctggcctaccacggcctgcgcctgctcaacgactccagtcacccc
cagcgccccggcctcgacgccctgcgcgagctggccggcattcaaaacgccgagctgaac
atcagcagcctcgtgttcggcttcgcgccccgcatcaacgccgccggccgcatgggcgac
gccaaacgctcggtggccatgctgctggccgacaccaccgccgaggccgtttcgacagcc
ggcgtggtcgacaaaaccaaccaggagcgccgcggcttcgacaccagcattacgaaagag
gcgctggaaatgatagagcaggacgacctgctccggtcagcccgcaccacggtgctgttc
aagcaggactggcacaagggcgtggtgggcatcgtggcctcccgctgcctcgacaagtac
taccgccctaccatcattctcaccgagagcaacggcaaagccaccggctcggcccgctcg
gtggtgggcttcgacgtgcaccaggccattgaggagtgcgccgatttgctcgaccagttc
gggggccatatgtacgccgccggcctcaccctgcccctggaaaacgtgcccgccttccgc
gaaaagtttgagcgcatcgtggccagccgcatccagcccgagcaactcattccgcccgtg
gaaatcgactggacgctccggctcagcgacattacgctgggcttcttcaacctgctgcgg
cagatggagccgttcggccccggcaaccccaaccccgtgtttcagtcggagcaggtgtac
gccgcccccgactcggcgcgcatcgtaggcaactcccaccttaagctggccctcacccag
gacggccgccacaccattgacgccatcggcttcgggctgggcgactactacacccgcatc
cgccagggccagccgttcagcgtgtgctacaccatcgagatgaacgagttccggggtgtg
cgcaacctccaactgcgcgtgaaggacattcgctgggagtga
DBGET
integrated database retrieval system
