Hymenobacter weizhouensis: OIS53_16305
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Entry
OIS53_16305 CDS
T11506
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hyu Hymenobacter weizhouensis
Brite
KEGG Orthology (KO) [BR:
hyu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyu03009
]
OIS53_16305 (rimO)
Enzymes [BR:
hyu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OIS53_16305 (rimO)
Ribosome biogenesis [BR:
hyu03009
]
Prokaryotic type
ribosomal protein modification factors
OIS53_16305 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UYZ62549
LinkDB
All DBs
Position
3918333..3919646
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AA seq
437 aa
AA seq
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MKVRSQQANKVNVITLGCSKNLVDSEVLMGQLRANNFEVTHEAAQSDANIVIINTCGFID
NAKQESIDTILRYADEKEAGRLEKLYVTGCLSQRYKDDLEQEIPQVDAYFGTLELPQLMK
KLEADYKHELVGERLLTTPSHYAYFKIAEGCNRPCSFCAIPLMRGKHVDRPIEDLVREAR
RLAGMGTKELILIAQDLTYYGLQQYGERKLADLMRHLSDVPGIDWIRLQYAYPSQFPLDA
LDVMNERANICKYLDMPLQHVSDNMLKTMRRGISKRRTIELVDTIRQRVPDIALRTTLIA
GHPGETQQDFEELYRFVEDTRFDRLGIFTYSHEDNTHSFTLPDDVPAEVKQDRADQIMEL
QQGISMELNEAKVGQTYNVLFDRKESGYFVGRTQYDSPEVDNEVLVPATKNTYVRLGDFA
QVQITEASDFDLYGRLV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcagaagccagcaggccaataaagtcaacgtcattaccctgggctgctccaaa
aacctcgtcgattcggaggtgctgatgggccagctccgcgccaacaacttcgaggtaacc
cacgaagcggcccagagcgacgccaacatcgtcattatcaatacctgcggcttcatcgac
aacgccaagcaggaaagcatcgacaccatcctgcgctacgccgacgaaaaggaggccggc
cgcctggagaagctctacgtgacgggctgcctgtcgcagcgctataaggacgacctggag
caggaaattccgcaggtagatgcctacttcggcaccctggagctgccccagctgatgaag
aagctggaggccgactacaagcacgagctggtgggggagcggctgctgaccacgccctcg
cactacgcttacttcaaaattgccgagggctgcaaccggccgtgctcgttctgcgccatc
ccgcttatgcgcggcaagcacgtcgataggcctatcgaagacctggtacgcgaggccagg
cgcctggccggcatgggcaccaaggagctgattctcatagcccaggacctgacctactac
ggcctgcaacagtacggcgagcggaagctggcggatcttatgcgccacctctccgacgtg
cccggcatcgactggattcggctgcagtacgcctacccctcgcagttcccgctggatgcg
ctggacgtgatgaacgagcgggccaacatctgcaagtacctggacatgcccttgcagcac
gtctcggataacatgctgaaaaccatgcgccgcggcatctccaagcgccggactatcgag
ctggtagataccattcggcagcgcgtgccggacattgccttgcgcaccacgcttattgcc
ggccaccccggcgaaacccagcaggacttcgaggagctgtaccgtttcgtggaagacacc
cgcttcgaccgtttgggcatcttcacctactcccacgaagacaacacgcactcgttcacc
ctccccgacgacgtgcccgccgaggtaaagcaggaccgcgccgaccagattatggagttg
cagcagggcatttccatggagttgaacgaggcgaaagtaggccagacctacaacgtgctt
ttcgaccggaaggaaagcggctacttcgtgggccgcacccagtacgactcgcccgaagta
gacaacgaagtgctagtaccggccaccaaaaacacctacgtccgcctcggcgacttcgcc
caggtgcagataaccgaggcctcagacttcgacttgtacggccggctggtgtaa
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