Hymenobacter weizhouensis: OIS53_18955
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Entry
OIS53_18955 CDS
T11506
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hyu Hymenobacter weizhouensis
Pathway
hyu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OIS53_18955 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyu03019
]
OIS53_18955 (recQ)
03400 DNA repair and recombination proteins [BR:
hyu03400
]
OIS53_18955 (recQ)
Enzymes [BR:
hyu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OIS53_18955 (recQ)
Messenger RNA biogenesis [BR:
hyu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OIS53_18955 (recQ)
DNA repair and recombination proteins [BR:
hyu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OIS53_18955 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
RecQ-1-like_HTH
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Phage_T4_Y04M
Motif
Other DBs
NCBI-ProteinID:
UYZ63060
LinkDB
All DBs
Position
complement(4549902..4552091)
Genome browser
AA seq
729 aa
AA seq
DB search
MKNQVKREADLKGKLKEVFGYGQFRGVQEDIIQNVIAGHNTFVIMPTGAGKSLCYQLPAL
VLPGTAIVISPLIALMKNQVDQLNAFGVNAQFLNSTLSKSEMNKVKRDVISGEVKLLYVA
PESLTKDETIEFLNKATISFVAIDEAHCISEWGHDFRPEYRKIRSIIDGLGAQIPIIALT
ATATPKVQQDIQKNLQMDDASVFKTSFNRTNLYYEVRPKHNTKKQLIQYVKLRKGQAGIV
YCLSRKKVEEIAELLRVNDVRALPYHAGLDPQVRMANQDAFLNEECDVIVATIAFGMGID
KPDVRFVIHYDTPKSIEGYYQETGRGGRDGLEGDCLMFYSYDDIVKLEKFNKDKPVTERD
NSKLLLQEMANYADSAVCRRKQLLHYFGETFERDCGFCDNCKHPKERFEAKNEVLLALKA
VVQTEERFGLDHIGTVLMGMNNPHVESYGHDKLPIYGQGKEHDAQFWHSLLRQSLLNGLL
EKDIENFGVVKITPKGLDFIENPHSIKLTEDHNYEEEVKEEQEQEEVQQAAGHDEALFDM
LKALRKKIAQQKGLPPYVLFQDPSLKEMATTFPTKLEDLAHVAGVGQGKAQKFGAPFLEL
IKKYVEENDIMTAADVVVKSAVNKSKIKIYIIQQIDKKMDLEEIASSKGIDMRELIEEIE
HICYSGTKLNLDYYINGVLDQERQDEIYDYFMSASTDNIAVALKELGTDDYTEEDLRLMR
IKFLSEVAN
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaccaagtgaagcgcgaggctgatctgaaaggcaagttaaaggaagttttcggg
tacggtcagttccggggcgtccaggaagacattattcaaaatgttattgccggccacaat
accttcgtgattatgcccacgggggccggcaaaagcctgtgctatcagctgcccgccctg
gtgctgcccggcacggccatcgtcatttcgccgctgattgccctgatgaaaaatcaggtc
gaccagctcaacgccttcggcgtcaacgcgcagttcctgaactccacgttgagcaagtcg
gagatgaacaaggtgaagcgcgacgttatcagcggcgaggtaaagctgctctacgtggcc
cccgaaagcctaaccaaggacgaaaccatcgagtttctgaacaaggccaccatctccttc
gtggctattgacgaggcccactgcatttcggagtggggccacgacttccggcccgagtac
cgcaaaatccgcagcatcatcgacgggctgggcgcgcagataccaattattgccctcacg
gccacggccacgcccaaggtgcagcaggacatccagaaaaacctgcaaatggacgatgcg
tcggtgttcaagacctcgttcaaccgcaccaacctctactacgaagtccggcccaagcac
aacaccaaaaagcagctgattcagtacgtgaagctgcgcaaaggccaggccggcattgta
tactgcctgagccgcaagaaggtagaggaaattgccgagctgctgcgcgtcaacgacgtg
cgcgccctgccctaccacgccggcctcgacccgcaggtgcgcatggccaaccaggacgct
tttctgaatgaagagtgcgacgtgattgtggccactattgccttcggcatgggcatcgac
aagcccgacgtgcgcttcgtgattcactacgacacgcccaagagcattgagggctactac
caggaaaccggccgcggcggccgcgacggcctggaaggggactgcctgatgttctacagc
tacgacgacatcgtgaagctggagaagttcaacaaggacaagcccgtaacggagcgcgac
aactccaagctgctcttgcaggaaatggccaactacgccgactcggccgtgtgccggcgc
aagcagctgctgcactacttcggcgagacgtttgagcgggactgtggcttctgcgacaac
tgcaagcaccccaaagagcggtttgaggccaaaaacgaagtgctgctggccctgaaagcc
gtggtgcagaccgaggagcggttcggtctggaccacatcggcacggtgctcatgggcatg
aacaacccgcacgtggaaagctacggccacgacaagctgcccatctacggccagggcaaa
gagcatgacgcgcagttctggcactcgctgctgcgccagagcctgctcaatggcctgttg
gagaaagacattgaaaacttcggggtcgtcaaaatcacgcccaagggcctcgacttcatt
gaaaatccgcattccatcaagctcaccgaggaccacaactacgaggaagaggtgaaagaa
gaacaggaacaggaagaagtgcagcaggccgccggccacgacgaggccttgtttgacatg
ctcaaggccctgcgcaagaaaatagcccagcagaaaggcctgccgccctacgtgctgttt
caggaccccagcctgaaggaaatggctaccaccttccccaccaagctggaagacctggcc
cacgtggccggcgtgggccagggcaaagcccagaagttcggggcgcctttcctggagctg
atcaagaagtacgtggaggaaaacgacattatgacggccgccgacgtggtggtgaaatcg
gccgtcaacaagtcgaaaatcaagatttacatcattcagcagatcgacaagaagatggac
ctggaggaaattgcttcctctaaaggcatcgacatgcgggagctgatagaggaaatcgag
cacatctgctactccggcaccaagctcaacctcgactactacatcaacggcgtgctggac
caggaacgccaggacgaaatctacgactacttcatgtcggccagcaccgacaacattgcc
gtggccctgaaggagctgggcaccgacgactacaccgaggaagacctgcgcctgatgcgc
atcaagttcctgagtgaagtggcgaattag
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