Hydrogenophaga sp. YM1: JNX00_00335
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Entry
JNX00_00335 CDS
T10285
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JNX00_00335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyy02000
]
JNX00_00335
Transporters [BR:
hyy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JNX00_00335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
QRR34376
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All DBs
Position
complement(68335..69393)
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AA seq
352 aa
AA seq
DB search
MQRRQLMGAVLAAATACAGLIGASAAHAQGAVTLRYATFLPPGGLFTKDDGVMGRWAKSV
EEASGGEVKIQILPGGTLGAAGRNPGAQLKLVTDGIADIAFVIPSTTPGRFPDDNLFGLP
VSESAAEGSLTFWKLHEQGLMRGYDDKSFYIIGLLVNPPNVLHTKGPVKKVEDLRGLRLQ
ASGAEQQELIRALGATPVGTVSVREAAEAISRGVVDGTPKDWLALHSFRIADATAHHVNI
PMGASTIMFALNRAKYDSLSPKARAAIDRFSGEPFVRMAGKLFDEYTDAKHKETVDDKKR
QVITLPPEERARWDQAMGTVVQDWRQRDATNERLWQAFTKTRAQVRGELGMK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgacgccaactcatgggggccgtgctcgcggcggccaccgcctgcgccggcctc
atcggcgcgagcgccgcccacgcgcagggggcggtcaccttgcgctacgccaccttcctg
cccccaggcggcctgttcaccaaggacgatggcgtcatgggccgctgggccaagtcggtc
gaggaggcctcgggcggcgaggtgaagatccagatcctgccgggcggcaccctgggtgcg
gcgggccgcaaccccggcgcgcagctcaagctcgtcaccgacggcatcgccgacatcgcc
ttcgtcattccgtccaccacgccggggcgttttcccgacgacaacctctttggcctgccc
gtgagcgagagcgcggccgagggctcgctcaccttctggaaactgcacgagcagggcctg
atgcgcggctacgacgacaagtccttctacatcatcggcctgctggtgaacccgcccaac
gtgctgcacaccaaaggcccggtgaagaaggtggaggacctgcgcggcctgcgcctgcag
gccagtggcgccgagcagcaggagctgatccgcgccctgggtgcgacgccggtgggcacg
gtgtccgtgcgcgaggcggccgaggccatcagccgcggcgtggtcgacggcacgcccaag
gactggctggccctgcactccttccgcatcgccgacgccaccgcgcaccacgtgaacatc
cccatgggcgcgtccaccatcatgttcgcgctcaaccgcgccaagtacgacagcctctcg
cccaaggcccgcgccgccatcgaccgcttcagcggcgagcccttcgtgcgcatggccggc
aagctgttcgacgagtacaccgacgccaagcacaaggagacggtggacgacaagaagcgc
caggtgatcaccctgccgcccgaggagcgcgcgcgctgggaccaggccatgggcaccgtg
gtgcaggactggcgccagcgcgacgccaccaacgagcgcctctggcaggccttcaccaag
acccgcgcgcaggtgcgcggcgaactgggcatgaagtga
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