Hydrogenophaga sp. YM1: JNX00_02510
Help
Entry
JNX00_02510 CDS
T10285
Name
(GenBank) TetR family transcriptional regulator C-terminal domain-containing protein
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
hyy Hydrogenophaga sp. YM1
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyy03000
]
JNX00_02510
Transcription factors [BR:
hyy03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
JNX00_02510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
HTH_20
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QRR34778
LinkDB
All DBs
Position
complement(502500..503141)
Genome browser
AA seq
213 aa
AA seq
DB search
MTAAAPPPARRPARESRQRILAAIREAAIQEFSLHGLKGTSTQAIAERAGLTKPQLHYYI
AGKEELYAELLDSVMMAWKIPFAPPGMTEPAEILAHYIRLKLDHAFDQPTVSRIFTREIL
DGGHNLDRYWPKARIWVEEEVAILNGWMARGLMRPMNAHLLLMHIWAMTQHHADFALQVR
EICGQGQQAPLDREAVANELIPFVLRGCGLLPA
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagcagcccctcccccggcgcgacgccccgcgcgcgaaagccgccagcgcatc
ctcgccgccatccgcgaagcggcgatccaggagttcagcctgcacggcctcaagggcacg
tccacccaggccatcgccgagcgcgcgggcctcaccaagccccaactgcactactacatc
gccggcaaggaggagctctacgccgagctgctcgactcggtgatgatggcctggaagatc
ccgttcgcgccgccgggcatgaccgagccggccgagatcctggcccactacatccgactg
aagctcgaccacgccttcgaccagcccaccgtctcgcgcatcttcacgcgcgagatcctg
gacggtggccacaacctcgaccgctactggcccaaggcgcggatctgggtcgaagaagag
gtggccatcctcaacggctggatggcgcgcggcctgatgcggcccatgaacgcccacctg
ctgctcatgcacatctgggccatgacgcagcaccacgccgacttcgcgctgcaggtgcgc
gagatctgcggccagggccagcaggcgccgctggaccgcgaggccgtggccaacgagctg
atccccttcgtgctgcgcggctgcggcctgctgccggcctga
DBGET
integrated database retrieval system
