Hydrogenophaga sp. YM1: JNX00_02580
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Entry
JNX00_02580 CDS
T10285
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JNX00_02580 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyy03400
]
JNX00_02580 (priA)
Enzymes [BR:
hyy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JNX00_02580 (priA)
DNA repair and recombination proteins [BR:
hyy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JNX00_02580 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
DUF5817
ADDB_N
Zn_ribbon_6
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QRR34792
LinkDB
All DBs
Position
complement(519239..521302)
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AA seq
687 aa
AA seq
DB search
MCHWPAVVVATPAHSGVGDALSYRSERALAPGTLVRVPLGAREVLGIVWRNDDAPPEGLA
EGQAREVAQVLDALPPLDAAWRDLVGFAARYYQRALGEVALAALPPPLRDLDPTQLARRL
KRPARAAPAAVDPDSARTLTPEQAAALEALAAADTAPALLFGATGSGKTEVYLQATARTL
AADADAQALILVPEINLTPQLEARFRARFGDEAVVCLHSGMTPAQRLAAWIAAHTGRARI
VLGTRLAVFASLPGLRLVVVDEEHDPSYKSQDGARYSARDLAIYRGKLQNARVLLGSATP
SLESWHASEQGRYRRLAMAARIGGGALPRLRLVDMNHQPKGALIAPPLLAAMGERIARGE
QCLVLINRRGYAPVLACHACGWKSGCPHCSAYRVFHKLDRTLRCHHCGFTQRVPRACPDC
GNLDIEPVGRGTEQVEEQLSGLLADVKRPDGGPVRVARMDADTTKAKGSLEAQLAALHAG
EVDVLVGTQMIAKGHDFRRITLVAAVQPDAALFAADHRAPERLFALLMQAGGRAGRDAAH
SGAAELWVQTWNPEHPLFAHLRTHDFAAFASGELAEREAAGMPPFAHQALLRADARTQEA
AQAFLNAAAAATQDLPHREAVTLFPAVPLTIQRVANVERAQLLVESPSRAALQRFLAAWQ
PVLLQCRGLPEARGLIRFAVDVDPLSL
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcactggcccgccgtggtcgtggccacccccgcgcacagcggggtgggcgacgcc
ctgagctaccgcagcgaacgcgccctggcgcccggcacgctggtgcgcgtgcccctgggc
gcgcgcgaggtcctgggcatcgtgtggcgcaacgacgacgcgccgcccgagggcctggcc
gaggggcaggcgcgcgaggtggcccaggtgctggacgccctgcccccgctggacgccgcc
tggcgagacctggtgggcttcgcggcgcgctactaccagcgggccctgggcgaggtggcc
ctggccgcgctgccgccgccgctgcgtgatctggaccccacgcagctggcgcgccggctc
aagcgccccgcgcgcgccgcgccggccgccgtggaccccgacagcgcccgcacgctcacg
cccgagcaggccgccgcgctggaggccctggccgccgccgacaccgcccccgccctgctg
ttcggcgccaccggcagcggcaagaccgaggtctacctgcaggccaccgcgcgcaccctg
gcggcggacgccgacgcccaggccctgatcctggtgcccgagatcaacctcacgccccag
ctggaggcgcgtttccgcgcccgcttcggcgacgaggccgtggtctgcctgcacagcggc
atgacgcccgcgcagcgcctggcggcctggatcgccgcgcacaccgggcgtgcgcgcatc
gtgctgggcacgcggctggcggtgttcgccagcctgcccggcctgcggctggtcgtggtc
gacgaggagcacgaccccagctacaagagccaggacggcgcgcgctactcggcgcgcgac
ctcgccatctaccgcggcaaattgcagaacgcgcgcgtgctgctgggctcggccacgccc
tcgctggagagctggcacgccagcgagcagggccgctaccggcgcctggccatggccgcg
cgcatcggcggtggcgcgctgccgcgcctgcgcctggtcgacatgaaccaccagcccaag
ggcgcgctgatcgcgccgccgctgctggcggccatgggtgagcgcatcgcgcgcggcgag
cagtgcctggtgctgatcaaccggcgcggctacgcgcccgtgctcgcctgccacgcctgc
ggctggaaaagcggctgcccccactgcagcgcctaccgcgtcttccacaagctggaccgc
accctgcgctgccaccactgcggcttcacccagcgcgtgccgcgcgcctgcccggactgc
ggcaacctcgacatcgagcccgtgggccgcggcaccgagcaggtggaggagcaactctcc
ggcctgctggcggacgtgaagcgccccgatggcggcccggtgcgcgtggcgcgcatggac
gccgacaccaccaaggccaagggcagcctggaggcgcagctggccgccctgcacgcgggc
gaggtcgacgtgctggtgggcacgcagatgatcgccaagggacacgacttccgccgcatc
acgctggtggccgccgtgcagcccgacgccgcgctgttcgccgccgaccaccgcgcgccc
gagcgcctgttcgcgctgctgatgcaggccggcgggcgcgccgggcgcgacgccgcgcac
agcggcgcggccgagctctgggtgcagacctggaaccccgaacacccgctgttcgcgcac
ctgcgcacgcacgacttcgccgccttcgccagcggcgagctggccgagcgcgaggcggcc
ggcatgccgcccttcgcgcaccaggcgctgctgcgcgccgatgcgcgcacgcaggaggcc
gcgcaggccttcctgaacgcggccgccgccgccacgcaggacctgccgcaccgcgaggcg
gtgaccctgttcccggcggtgccgctcaccatccagcgcgtggccaatgtggagcgcgcg
cagctgctggtggaaagcccgtcgcgcgccgcgctgcagcgcttcctggccgcctggcaa
ccggtgctgctgcaatgccgcggcctgcccgaggcacgcggcctgatccgcttcgcggtg
gacgtggacccgctgtccctatga
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