Hydrogenophaga sp. YM1: JNX00_04745
Help
Entry
JNX00_04745 CDS
T10285
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy00300
Lysine biosynthesis
hyy00470
D-Amino acid metabolism
hyy01100
Metabolic pathways
hyy01110
Biosynthesis of secondary metabolites
hyy01120
Microbial metabolism in diverse environments
hyy01230
Biosynthesis of amino acids
Module
hyy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JNX00_04745 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JNX00_04745 (lysA)
Enzymes [BR:
hyy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JNX00_04745 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QRR35189
LinkDB
All DBs
Position
complement(970544..971824)
Genome browser
AA seq
426 aa
AA seq
DB search
MPLSPLPAFLTQRHGELHVEDLSLDSLARAHGTPLFVYSQAAMLQALGAYQRGLAGRSHL
ICYAMKANSSLAILQTLVRAGCGLDIVSGGELERALAAGCAPERIIFSGVGKTRAEMRRA
LDVGIGCFNVESRAELTVLDEVARAAGRRARVSVRVNPDVDAQTHPYISTGLKDNKFGIA
HDEVLDTYRQAAACSGLEVVGIDCHIGSQITQAAPYLDALERVLDLVAAIEGLGLGLRLH
HIDFGGGLGIDYRGDAPPAADALWAQLLQRLDARGFGDRQILIEPGRSIVGNAGVCLTEV
LYLKPGEHKNFLIVDAAMNDLPRPAMYQAYHRIEPLRARTDTAPLTWDVVGPVCESGDWL
GRDRELAVQAGDRLAVLSAGAYCMSMASNYNTRGRAAEVLVDGNRATVIRQRETAADQMR
LETPLP
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgtcgcccctgcccgccttcctgacgcaacgtcacggtgaactgcacgtcgag
gacctgagcctcgacagcctggcccgggcccacggcaccccactcttcgtctacagccag
gccgccatgctgcaggccctgggcgcgtaccagcgcggcctcgccgggcgctcgcacctc
atctgctatgcgatgaaggccaactcctcgttggccatcctgcagacgctggtgcgcgcg
ggctgcgggctggacatcgtctcgggcggtgagctggagcgtgcgctggccgctggctgc
gcgcccgaacgcatcatcttttcgggtgtgggcaagacccgcgccgagatgcgccgcgcg
ctcgatgtcggcatcggctgcttcaacgtcgagagccgcgccgagctgaccgtgctcgat
gaggtcgcgcgcgccgccgggcggcgcgcgcgcgtgagcgtgcgcgtcaaccccgacgtg
gacgcgcaaacgcacccttacatctccaccggcctgaaggacaacaagttcggcatcgcg
cacgacgaggtgctggacacctaccggcaggctgcggcctgcagcggccttgaggtggtc
ggcatcgactgccacatcggctcgcagatcacgcaagcggcgccctacctcgacgcgctg
gagcgcgtgctggacctggtcgccgccatcgaaggcctcggtttgggcctgcgcctgcac
cacatcgacttcggcggtggcctgggcatcgactaccgcggcgatgcgcctcccgccgcc
gacgcgctgtgggcgcagttgctgcagcgcctggacgcgcgcggcttcggcgaccgccag
atcctgatcgagccgggccgctccatcgtgggcaacgccggtgtctgcctgaccgaggtg
ctctacctcaagccgggagagcacaagaacttcctcatcgtggacgcggccatgaacgat
ttgccgcgccccgcgatgtaccaggcctaccaccgcatcgaaccactgcgcgcgcgcacc
gacaccgccccgctcacttgggacgtggtcggccctgtctgcgaaagcggcgattggctg
ggccgtgaccgcgagctggcggtgcaggccggcgatcggctggcggtgctgtcggccggc
gcctactgcatgagcatggccagcaactacaacacgcgcggccgcgccgccgaggtgctg
gtcgatggcaaccgggccaccgtgatccgccagcgcgaaaccgccgccgatcagatgcgg
ctggaaacgcccctgccctga
DBGET
integrated database retrieval system