Hydrogenophaga sp. YM1: JNX00_05210
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Entry
JNX00_05210 CDS
T10285
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JNX00_05210 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hyy01007
]
JNX00_05210 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyy03016
]
JNX00_05210 (aspS)
03029 Mitochondrial biogenesis [BR:
hyy03029
]
JNX00_05210 (aspS)
Enzymes [BR:
hyy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
JNX00_05210 (aspS)
Amino acid related enzymes [BR:
hyy01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JNX00_05210 (aspS)
Transfer RNA biogenesis [BR:
hyy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JNX00_05210 (aspS)
Prokaryotic type
Other AARSs
JNX00_05210 (aspS)
Mitochondrial biogenesis [BR:
hyy03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
JNX00_05210 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QRR35273
LinkDB
All DBs
Position
1057642..1059444
Genome browser
AA seq
600 aa
AA seq
DB search
MSMRSHYCGLVTEALMGQTVTLSGWVNRRRDHGGVIFIDLRDREGTVQVVCDPDRPEMFK
TAEEVRNEFCVQVVGLVRARPEGTTNDTIKSGKIEVLCHELKVLNPSVTPPFQLDDDNLS
ETTRLTHRVLDLRRPYMQRNLMLRYRVAMEVRKFLDANGFIDIETPMLTKSTPEGARDYL
VPSRVHDGMFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETS
FLTEQDIRDMFQGMIKTVFQNVLGIDLGEFPVMPYAEAMHRYGSDKPDLRVTMEFTELTD
VMADVDFKVFSAPAQMKTGRVVALRVPGGGEMSRSEIDAYTEFVKIYGAKGLAWIKVNDV
AKGRDGLQSPIVKNLHDAALEAILQRSGAQNGDILFFGADKAKVVNDAIGNLRIKIGHSE
LGKKNGLFEDRWAPMWVVDFPMFEHDDEEDRWTAVHHPFTAPKDGHEDFMVSDPGRCIAK
GYDMVLNGWEIGGGSVRIHRADVQAKVFDALKIGPEEQRLKFGFLLDALQYGAPPHGGLA
FGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLRNPDSVKNS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgcgaagccactactgcggtctggtgaccgaagccctgatgggccaaaccgtc
acgctgtcgggctgggtgaaccgccggcgcgaccacggtggcgtcatcttcatcgacctg
cgcgaccgcgaaggcacggtgcaggtggtctgcgacccggaccgtcccgagatgttcaag
acggccgaagaggtgcgcaacgagttctgcgtgcaggtggtcggcctggtgcgcgcgcgc
cccgagggcaccaccaacgacaccatcaagagcggcaagatcgaggtgctgtgccacgag
ctgaaggtgctcaacccctcggtcacgccgccgttccaactagacgacgacaacctgtcc
gagaccacccgcctcacgcaccgcgtgctcgacctgcgccgcccctacatgcagcgcaac
ctgatgctgcgctaccgcgtggccatggaagtgcgcaagttcctcgacgccaacggcttc
atcgacatcgagacgccgatgctcaccaagagcacgcccgagggcgcgcgcgactacctg
gtgcccagccgcgtgcacgacggcatgttcttcgcgctgccgcagtcgccccagctgttc
aagcaactgctgatggtggccggcttcgaccgctactaccagatcaccaagtgcttccgc
gacgaggacctgcgcgccgaccgccagcccgagttcacgcagatcgatatcgagacctcc
ttcctgaccgagcaggacatccgcgacatgttccagggcatgatcaaaacggtgttccag
aacgtgctcggcatcgacctcggcgagttcccggtcatgccctacgccgaagccatgcac
cgctacggctcggacaagcccgacctgcgcgtgaccatggagttcaccgaactcaccgac
gtcatggccgacgtggacttcaaggtcttcagcgcgcccgcgcagatgaagaccggccgc
gtggtggccctgcgcgtgcccggcggcggcgagatgagccgcagcgagatcgatgcgtac
accgagttcgtcaagatctacggcgccaaaggcctggcctggatcaaggtcaacgacgtg
gcgaagggccgcgacggcctgcagagcccgatcgtgaagaacctgcacgacgcggcgctc
gaggccatcctgcagcgcagcggcgcgcagaacggcgacatcctgttcttcggcgccgac
aaggccaaggtggtcaacgacgccatcggcaacctgcgcatcaagatcggtcacagcgag
ctgggcaagaagaacggcctgttcgaggaccgctgggcgccgatgtgggtggtggacttc
cccatgttcgagcacgacgacgaggaagaccgctggaccgcggtgcaccaccccttcacc
gcgcccaaagacggccacgaggacttcatggtcagcgacccgggccgctgcatcgccaag
ggttacgacatggtgctcaacggctgggaaatcggcggcggttcggtccgtatccaccgc
gccgacgtgcaggccaaggtctttgacgcgctcaagatcggccccgaagagcagcgcctg
aagttcggcttcctgctcgacgcgctgcagtacggcgcgccgccgcacggtggcctggcc
ttcggcctggaccgcatcgtcaccctcatgacgggcgccgagtcgatccgcgacgtgatc
gccttccccaagacccagcgcgcccagtgcctgctcacgcaggcgcccagcccggtggac
gaaaagcagctgcgcgagctgcacatccgcctgcgaaaccccgattcggtcaagaacagc
tga
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