Hydrogenophaga sp. YM1: JNX00_05255
Help
Entry
JNX00_05255 CDS
T10285
Name
(GenBank) DUF2235 domain-containing protein
Organism
hyy Hydrogenophaga sp. YM1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
T6SS_Tle1-like_cat
RHS
DUF7379
OCRE
Motif
Other DBs
NCBI-ProteinID:
QRR35280
LinkDB
All DBs
Position
1066143..1071473
Genome browser
AA seq
1776 aa
AA seq
DB search
MNWNHHRVVLKAARSGARWLSGLLGLALLLTGLGASAACDPSVSCCAGAPSTGSPCGGAG
AATLGNTSGVDSGAGNPLNVLGGNKFQREVDMPALPGVLGLELIRYYNSADTERHLLGRG
WRLSYETTLRVGTGALAGTLEVVQADGTRIAFALPPDERQGPGQGQGDLYRGLNPLQGLV
HRLHTPRGSEYLWRWADGRQLRFNTRGQLEQIRAPSGEFLSLRYDGRGWLSEVIDPAGRR
LRLHVLDKASAQDPQRYRGVQGIDTPVGRFVYEHGGQLPEGSSARPSEPIANLSQVIYPA
QAPSEGGAASEMRSRRYHYEDPRFPTLLTGISAQRLSRHGQARNERLNTWAYDEERRAVL
SFKGERPSSTTGTTGTAVATGQDQVSLQHGPTEHGQRTTVLANSLGQRTVYTSTTIAGEP
RLLQAIGPGCASCTPGNRRYGYDRVGRLIEETTLDEKGHPLRSTRTERDAYGRPVKVSTI
TYRNGKAQAPQPRVRYEYAPVDVSDPQALPSPRPVLIAIPSVVPGKEHTTRIAYNAAMQP
VEVTEEGFSPVDEQGLAAAQGVPIARTRAYRYATVNGRSVLQSIDGPLPDGASNSASNSA
LNGTVDADITRLEWDARGDHLTAFISPGGLRTSITTDPDSGRIAQFTGPDGVTDIPTYAP
GGDLISLTRRRGEVVLSQQRLRYDANGLPIESFRRIGERDVPQTRQAFDAAGRLLWQADA
LGVLRLASYDTEGHLLRSRVVGAGIDQQERYGRDAQGRLLRVDDHTGGLRELVRDEVGRL
IATINPLGRWTRYERDTEGLRTVRSAHTGKPLVLRYASDGRGHWRRLDAEAHDGRRVVRR
ATHRRLLDDFGREVLVDNPDSGRELRRFDAADRLVRVLQADGGAVDFAYDALGRLVRRSA
TAPSAAQADSGHAPQTVRYLYEGTRLVEIQGPEQTECYTYDDQGRLGTASIALRLNDGRR
VQNTTRYRYDAWGRLAAQSLPDGSELQFERNGQGQVVALHRQTGPSWAPFGWGRMTLAQG
LQRDLVGLTHLRYGNGIEGRWQRSREGVLVRVVYGAAPDEAPALWDSRLRYDAAGNVLMQ
SQFADSAAAQPAQTVLAYDAQDQLAQALRTGIARNKGVGVDAEQSLAVWRYHHDSLGNRL
LAQSQAAQGPTATYQLAYAPDSNRLRGPVLDAAGRVLQDGGRRYAWDSLGRLASVTQEGI
TTRYRYNHRGQRIAKQGRAQQHYLYDGQRHRTAELDAQGRLTRQYVWLGDQLLAVIDPPQ
PLALRAPAEGVFGSLWRTAQTAWERLSGAAPSVHYVHVNHLGAPVAATDERGHTTWAADY
APFGQRLASQSGGFLKTATDQEPPGNARGLRLDLRLPGQWEDEETGLYYNDQRYYDPQAG
RYLSPDPLGLAGGLNAYAYADNNPLGFADPLGLVLFAFDGTDNTNDEAWLRARGSSLTNV
WQFRQLYQDGAARYVSGVGTLHRDPQYGDIIAPGLDDAVNTTGPARIDRMLQYFNDEADL
ATKDDEAMEIDIVGFSRGAAQARDFANQIVGATHDGFYRYTVTGSDGAQEARCQKVNFRF
MGLFDTVLSTNWSGHAYQLGIPTEFSYVAHAVALNEYRGDISHPYGSVGAFPLESILPGM
ASPAPLEGQTRTERGFIGAQADIGGGFGEDENQLAQVALVWMLDQAKAAGVNMADPDELH
SIVTNPVIHDKSDSIQTGTPAPGSEDRQVRYRNGARAGQREMPFTEGMSWADTQSFIHYL
PVDDPRRQQFVTGTVDMQGYLDWLNANGYGIDMEVQ
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaatcaccaccgcgtggtgctgaaggccgcgcgtagcggtgcaaggtggctg
tctggcctgctgggtctggcgctgctgctcacggggcttggcgcatcggccgcctgcgac
cccagcgtgagctgctgcgccggtgcccccagcaccggcagcccctgcggcggggcgggc
gcggccaccctgggcaacacctcgggcgtggacagcggtgcgggcaaccccctcaatgtg
ctgggcggcaacaagttccagcgcgaggtggacatgcccgcgctgcccggcgtgctcggc
ctggaactcatccgctactacaacagcgccgacaccgagcgccacctgctcgggcgcggc
tggcgcctgagctacgagaccacgctgcgcgtgggcaccggtgcgctggcgggcacgctg
gaagtcgtgcaggccgatggcacgcgcatcgccttcgccctgcctccagacgaacgccaa
ggcccaggccagggccaaggcgatctctaccgtggcctgaacccgctgcaaggcctggtg
caccgactgcacacgccgcgcggcagcgagtacctctggcgctgggccgacgggcgccag
ctgcgcttcaacacccggggccagctggagcagatccgcgcgcccagcggcgaattcctc
agcctgcgctacgacgggcgtggctggctcagcgaagtgatcgaccccgccgggcggcgc
ctgcgcctgcatgtgctggacaaggccagcgcccaggacccgcagcgctaccgcggcgtg
cagggcatcgacacgcccgtggggcggtttgtttatgaacacggcgggcaactgcccgag
ggctccagcgccaggcccagcgagcccatcgccaacctcagccaggtcatctatccggcg
caggcgccgagtgaaggtggcgcggcctcggagatgcgcagccgccgctaccactacgaa
gacccgcgctttccgacgctgctcaccggcatcagcgcacagcggctgagccgccatggc
caagcccgcaacgagcgcctaaacacctgggcctacgacgaagagcgccgcgccgtgctc
agcttcaagggcgaacgcccttcgagcacgactggtacgactggcacggcggtcgccacg
ggccaggatcaggtgagcctgcaacacgggcccaccgagcacgggcagcgcaccaccgtg
ctcgccaacagcctgggccagaggaccgtctacaccagcaccaccatcgccggcgagccg
cgcctgctgcaagccatcgggcccggctgcgcgagttgtactccgggcaaccggcgctac
ggctacgaccgcgtgggtcggctcatcgaagagaccaccctcgacgagaagggccacccc
ctgcgcagtacccgcaccgaacgcgacgcctacggccgtccggtcaaggtcagcaccatc
acctaccgcaacggcaaggcacaggcgccccaaccgcgtgtgcgctacgaatacgcgccc
gtcgatgtgagcgatccgcaggcgctgcccagcccgaggcccgtgctcatcgccattccc
agcgtggtcccgggcaaggagcacaccacccgcattgcctacaacgccgcgatgcagcct
gtcgaggtcaccgaagaaggcttcagtcccgtggacgaacagggccttgccgccgcgcag
ggtgtgcccatcgcccgcaccagggcctaccgctacgcaacggtgaacggccgcagcgtt
ctgcagagcatcgacgggccgctgcccgacggcgcgtcgaacagtgcatcaaacagcgcg
ttgaacggcaccgtcgatgccgacatcacccgcctggagtgggacgcgcgcggtgaccac
ctcacggccttcatctcccccggtggcttgaggacaagcatcaccaccgacccagacagc
ggccgcatcgcacaattcaccggtcccgacggtgtcaccgacatccccacctacgccccg
ggaggcgatctgatttcgctgacgcggcggcgcggcgaagtggtgttgtcgcagcagcgc
ttgcgctacgacgccaacggcctgcccatcgagagctttcggcgcatcggtgagcgagat
gtcccgcagacacgacaggccttcgacgccgccgggcggctgctgtggcaagccgatgcg
ctcggcgtgctgcgcctggcgagctacgacaccgaaggccatctgctccgctcgcgtgtc
gtcggtgccggcatcgaccagcaagagcgttacggccgcgatgcccagggacggttgctg
cgcgtggacgaccacaccggtggtctccgcgaactggtgcgtgacgaggtcgggcgtttg
atcgccaccatcaatccactgggccgctggacccgctacgagcgcgacaccgagggactg
cgcaccgtgcggtcggcccacaccggcaagccattggttttgcgctatgccagcgatggc
cgagggcactggcgccgcctcgacgccgaagcccacgatggccggcgcgtggtgcgccgc
gcgacccaccggcgcttgctcgacgatttcggccgtgaggtgctcgtcgacaaccccgac
agcggccgcgagctgcgccgcttcgatgcggcggaccgactcgtgcgggtgctgcaggcc
gatggcggcgctgtcgacttcgcctacgacgcgctcgggcggctggtgcgccgcagcgcg
acggcgccatccgcggcccaggcggacagtgggcatgcgccgcagacggtgcgctacctc
tacgaaggcacccgcctggtcgagatccaggggccggagcagacggagtgctacacctac
gacgaccagggccgcctcggcacggccagcatcgcgctgcgcctcaacgatggccggcgg
gtgcagaacaccacgcgctaccgctacgacgcctggggccggctcgccgcgcaaagcctg
cccgacggcagcgagctgcagttcgagcgcaacggccaggggcaggtcgtcgcgctgcat
cggcagacgggcccgtcctgggcgcctttcggctggggacgcatgaccttggcgcagggg
ctgcaacgcgaccttgtcggcctcacgcatctgcgctacggcaacggcatcgaggggcgc
tggcagcgcagccgcgagggcgtgctggtgcgcgtggtgtacggggcggcaccggacgag
gcgcccgcgctgtgggacagccgcctgcggtacgacgcggcgggcaacgtcctgatgcaa
agccagttcgccgacagcgccgcggctcagcccgcacagacggtgctggcctacgacgcg
caggaccaactggcgcaggccctgcgcacgggcatcgcccggaacaagggtgtgggcgtg
gacgccgagcagtccctggccgtctggcgctaccaccacgacagcctgggcaaccgcctg
ctcgcgcagtcgcaagcggcgcagggcccaacggccacctaccaactcgcctacgcgccc
gacagcaaccggcttcgcggcccggtgctggacgcggccggccgggtgctgcaagacggc
ggtcggcgctacgcgtgggacagcctggggcggctggcgagcgtcacgcaagagggcatc
accacccgctaccgctacaaccaccggggccagcgcatcgccaagcaaggccgtgcgcaa
cagcactacctctacgacgggcagcgccaccgcaccgccgaactcgacgcccaggggcgg
ctcacgcggcagtacgtgtggctcggtgaccaactgctggcggtgatcgacccgccgcag
cccctggcgctgcgcgcaccggccgaaggcgtgttcgggtcgctgtggcgcacggcgcaa
accgcctgggaacgcttgagcggcgccgcgccgagcgtccactacgtgcacgtgaaccac
ctgggcgcgcccgtggcggccaccgacgagcgcggccacaccacctgggcggcggactac
gcgcccttcggacagcgcctggcgtcgcagtccggcgggttcctcaagacggccacggac
caggagccgcccggcaacgcgcgcggcctgcggctggacctgcgcctgcccgggcaatgg
gaagacgaagaaaccggcctgtactacaacgaccagcgctactacgacccccaggccggg
cgctacctcagccccgatccgctggggttggcgggtggtctcaatgcctatgcctatgcg
gacaacaacccgctggggtttgccgatccgctggggttggtgttgtttgcgtttgatgga
accgacaacaccaacgacgaggcctggctgcgggcgcggggcagttcgttgaccaacgtg
tggcagtttcgtcagttgtaccaggacggtgcggctcgctatgtcagtggcgtggggacc
ttgcatcgtgatccacagtacggcgacatcattgcccccgggctggacgatgccgtcaac
accacggggcccgctcgcatcgaccgcatgctccagtacttcaacgacgaagcggatctc
gcaaccaaggacgacgaggccatggagatcgacatcgtcggtttcagccgcggggccgcc
caggcgcgcgacttcgccaaccagatcgtgggcgccacccacgacggtttctaccgctac
acggtgaccggcagcgacggcgcgcaggaagcgcgctgccagaaggtcaatttccgattc
atggggttgttcgacacggtgctgagcacgaactggagtggccacgcctatcagctgggc
attccaaccgagttctcttatgtggcccatgcggtggcattgaatgagtaccgaggcgac
atctctcatccctatgggtctgtgggggcttttccgctggagtccatcttgccgggcatg
gcgagtcccgcgccgttagaaggccagacgcgcaccgagcgcggctttattggcgcgcaa
gccgacattgggggtggtttcggggaggacgagaatcaattggctcaggtggccctagtc
tggatgctggatcaagccaaggcggccggtgtcaacatggccgaccccgatgaacttcat
agcatcgtgaccaacccggttatccacgacaaaagcgacagcatccagaccggtacgccg
gctccaggatcggaagacaggcaggtgcgctaccgcaacggagcgcgcgctggtcaacgc
gagatgcctttcaccgaagggatgagctgggcggacacgcagtccttcatccattacctg
ccggtcgacgatccgcgcaggcagcagttcgtcacggggacagtggacatgcagggctat
ctggattggctcaatgccaatggctacggcatcgacatggaggtgcaatga
DBGET
integrated database retrieval system
