Hydrogenophaga sp. YM1: JNX00_05540 Help Entry JNX00_05540       CDS       T10285                                  Name (GenBank) AMP-binding protein   KO K01897   long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] Organism hyy  Hydrogenophaga sp. YM1 Pathway hyy00061   Fatty acid biosynthesis hyy00071   Fatty acid degradation hyy01100   Metabolic pathways hyy01212   Fatty acid metabolism hyy02024   Quorum sensing hyy04146   Peroxisome Module hyy_M00086   beta-Oxidation, acyl-CoA synthesis Brite KEGG Orthology (KO) [BR:hyy00001]  09100 Metabolism   09103 Lipid metabolism    00061 Fatty acid biosynthesis     JNX00_05540    00071 Fatty acid degradation     JNX00_05540  09140 Cellular Processes   09141 Transport and catabolism    04146 Peroxisome     JNX00_05540   09145 Cellular community - prokaryotes    02024 Quorum sensing     JNX00_05540  09180 Brite Hierarchies   09181 Protein families: metabolism    01004 Lipid biosynthesis proteins [BR:hyy01004]     JNX00_05540   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:hyy04147]     JNX00_05540 Enzymes [BR:hyy01000]  6. Ligases   6.2  Forming carbon-sulfur bonds    6.2.1  Acid-thiol ligases     6.2.1.3  long-chain-fatty-acid---CoA ligase      JNX00_05540 Lipid biosynthesis proteins [BR:hyy01004]  Acyl-CoA ligase   Long/very long chain acyl-CoA ligase    JNX00_05540 Exosome [BR:hyy04147]  Exosomal proteins   Exosomal proteins of breast milk    JNX00_05540   Exosomal proteins of breast cancer cells    JNX00_05540 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AMP-binding AMP-binding_C Motif Other DBs NCBI-ProteinID:  QRR35335 LinkDB All DBs Position 1129005..1130537 Genome browser AA seq 510 aa AA seqDB search MHFNHGVFGLLWRTATQRPQAPAVALGERVVARYGDLLARALDVSAGLARLGCRPGDRVV MFMKNQPEWLALMFGCWARGLVVVPVNVKLHARELAFILDDCQARALFHDPGHQDALDAL GLVPRTPGIAVGGADYQRLLGAPPMAPEPVAPDALAWLFYTSGTTGRPKGAMLSHANLLA MASAYTNDVEPEGMGRAILHAAPMSHGSGLYILPHVLHGSLHICPESRGFEVDEIDRLMA VHRGVSMFAAPTMVTRLTLSAATDLPGLQTLVYGGGPMYVADCVQAMDRFGERLAQIYGQ GETPMTISSLTRSQHERGHPRLQARLASCGYAQTGVQIRILDDRGEALPVGETGEIVVRA PTVMLGYWNLPDATRKTLRDGWLYTGDVGAFDADGLLTLKDRSKDVIISGGTNIYPREVE EVLLRHPAIREVCVLGMPDADWGESVVAVYSCRDGEVATVQELDQLCIEHIARFKRPKRY LQAAELPKNAAGKILKAKLREQLAASGRAG NT seq 1533 nt NT seq  +upstreamnt  +downstreamnt atgcatttcaatcacggtgttttcggcctgttgtggcgcaccgccacgcagcggccccag gccccggccgtggccctgggcgaacgggtcgtggcgcgctacggcgatctgctcgcgcgc gccctggacgtgtcggccgggctggcccgcctgggctgccggcccggcgaccgggtggtg atgttcatgaagaaccagcccgagtggctggccctgatgttcggctgctgggcgcgtggt ctggtggtcgtgccggtcaacgtgaagctgcacgcgcgcgagctggcgttcatcctggac gactgccaggcgcgcgcgctgttccacgacccgggccaccaggacgcgctggacgcgctc ggcctggtgccgcgcacgcccgggatcgcggtcggcggtgccgactaccagcgcctgctg ggcgcgcccccgatggcgcccgagccggtggcaccggacgccctggcctggctgttctac accagcggcaccaccggacggcccaagggcgccatgctcagccacgccaacctgctggcg atggccagcgcctacaccaacgacgtcgagcccgaaggcatgggccgcgccatcctgcac gccgcgcccatgtcgcacggctcgggcctgtacatcctgccgcacgtgctgcacggctcg ctgcacatctgccccgagtcgcgcggcttcgaggtcgacgagatcgaccgcctgatggcc gtgcaccggggcgtgtcgatgttcgccgcgccgaccatggtcacccggctcacgctgtcg gcggccaccgacctgcccggcctgcagacgctcgtctatggcggcgggccgatgtacgtg gccgattgcgtgcaggccatggaccgttttggcgaacgcctggcgcagatctacggccag ggcgaaacgcccatgaccatcagctcgctgacgcgctcgcagcacgagcgcggccacccc cggctgcaggcgcgcctggcgtcctgcggctacgcgcagaccggcgtgcagatccgcatc ctggacgaccgcggcgaggccctgccggtgggcgagacgggcgagatcgtggtgcgcgcg cccacggtcatgctggggtactggaacctgccggacgcgacccgcaagaccctcagggac ggctggctgtacacgggcgacgtcggcgccttcgacgcggacggcctgctgacgctgaag gaccgcagcaaggacgtgatcatcagcggcggcaccaacatctacccgcgcgaggtcgag gaggtgttgctgcgccaccccgcaatccgcgaggtgtgcgtgctcggcatgccggacgcc gattggggcgaatcggtggtggccgtctacagctgccgcgacggcgaggtcgccacggtg caggagctggaccagctctgcatcgagcacatcgcgcgctttaagcgacccaagcgctac ctgcaggccgcggaactgcccaagaacgcggccggcaagatcctcaaggcgaagttgcgc gagcaactggcggcatccggccgggccggctga

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