Hydrogenophaga sp. YM1: JNX00_05795
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Entry
JNX00_05795 CDS
T10285
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy00730
Thiamine metabolism
hyy01100
Metabolic pathways
hyy01240
Biosynthesis of cofactors
Brite
Enzymes [BR:
hyy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
JNX00_05795 (thiC)
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
DUF7158
Motif
Other DBs
NCBI-ProteinID:
QRR35382
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Position
complement(1181192..1183090)
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AA seq
632 aa
AA seq
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MNAPDKFAPLLTLTREPFPASTKVFVPGAQAGVQVPMREIALTNGERVTVYDTSGPYTDP
TVSIDVRKGLAPVRAAWIEARGDTEAYSGRERQALDDGVKHEVPDAHAAERIAALRSEAA
ALQRTPRRAKAGANVTQMHYARQGIVTPEMEYIAIRENGKRDWMREYLGDPEREARLRGN
PMGARIPEIITPEFVREEVARGRAIIPANINHPELEPMIIGRNFGVKINANIGNSAVTSS
IEEEVEKLVWSIRWGGDTVMDLSTGKNIHTTRDWIVRNSPVPIGTVPIYQALEKVGGVAE
DLSWEIFRDTLIEQAEQGIDYFTIHAGVRLPFIHLTTKRRTGIVSRGGSILAKWCITHHK
ENFLYTHFEEICEIMKAYDVSFSLGDGLRPGSGADANDEAQFAELRTLGELTQIAWKHDV
QTMIEGPGHVPMHLIQANMDEQLKHCHEAPFYTLGPLTIDIAPGYDHIASAIGAAMIGWM
GTAMLCYVTPKEHLGLPDRDDVKQGIIAYKIAAHAADIAKGHPGARARDDAMSKARFEFR
WRDQFALGLDPDTAEAYHDETLPKDSSKEAHFCSMCGPKFCSMKITQDVRDYAEQKGLAE
AEALQQGMAEKSAQFKAAGGEFYVPLDTLKKG
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccccgacaagttcgcccccctgctcacgctcacgcgcgagcccttccccgcc
tccaccaaggtcttcgtgcccggcgcgcaggccggcgtgcaggtgcccatgcgcgagatc
gcgctcaccaacggcgagcgcgtgacggtctacgacacctcgggcccctacaccgacccg
acggtgagcatcgacgtgaggaagggcctggcccccgtgcgcgcggcctggatcgaggcc
cgcggcgacaccgaggcctacagcgggcgcgagcgccaggcgctggacgacggcgtgaag
cacgaggtaccggatgcgcacgcggccgagcgcatcgccgccctgcgcagcgaggccgcc
gcgctgcagcgcacgccgcgccgcgccaaggccggcgccaacgtcacccagatgcactac
gcgcgccaaggcatcgtcacccccgagatggagtacatcgccatccgcgagaacggcaag
cgcgactggatgcgcgagtacctcggcgaccccgagcgcgaggcgcgcctgcgcggcaac
cccatgggcgcgcgcatccccgagatcatcacgcccgagttcgtgcgcgaagaggtggcg
cgcgggcgcgccatcatcccggccaacatcaaccaccccgagctcgagccgatgatcatc
ggccgcaacttcggcgtgaagatcaacgccaacatcggcaactcggccgttacctccagc
atcgaggaagaggtggagaagctcgtgtggtccatccgctggggcggcgacacggtgatg
gacctctcgaccggcaagaacatccacaccacgcgcgattggatcgtgcgcaactcgccc
gtgcccatcggcaccgtgcccatctaccaggcgctggagaaggtgggcggcgtggccgag
gacctcagctgggagatcttccgcgacaccctgatcgagcaggccgagcagggcatcgac
tacttcaccatccacgcgggcgtgcgcctgccctttatccacctcacgaccaagcggcgc
accggcatcgtctcgcgcggcggctccatcctggccaagtggtgcatcacccaccacaag
gagaacttcctctacacgcacttcgaggaaatctgcgaaatcatgaaggcctacgacgtg
agcttctcgctcggcgacggcctgcgccctggcagcggcgccgacgccaacgacgaggcc
cagttcgctgagctgcgcacgctgggcgagctcacgcagatcgcctggaagcacgacgtg
cagaccatgatcgaaggccccggccacgtgcccatgcacctgatccaggccaacatggac
gagcagctcaagcactgccacgaggcgcccttctacaccctgggcccgctgaccatcgac
atcgcgccgggctacgaccacatcgcctcggccatcggcgcggccatgatcggctggatg
ggcacggccatgctgtgctacgtcacgcccaaggagcacctgggcctgcccgaccgcgac
gacgtgaagcaggggatcattgcctacaagatcgccgcgcacgcggccgacatcgccaag
ggccaccccggcgcgcgcgcgcgcgacgacgccatgagcaaggcgcgcttcgagttccgc
tggcgcgaccagttcgcgctcggcctggacccggacaccgccgaggcctaccacgacgaa
accctgcccaaggactcgtcgaaggaggcgcacttctgttccatgtgcggccccaagttc
tgctcgatgaagatcacgcaggacgtgcgcgactacgccgagcagaaaggcctggccgag
gccgaggcgttgcagcagggcatggccgagaagtcggcccagttcaaggccgcgggcggc
gagttctacgtgccgctcgacacgctgaagaagggctga
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