Hydrogenophaga sp. YM1: JNX00_06485
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Entry
JNX00_06485 CDS
T10285
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JNX00_06485 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hyy03019
]
JNX00_06485 (orn)
03009 Ribosome biogenesis [BR:
hyy03009
]
JNX00_06485 (orn)
Messenger RNA biogenesis [BR:
hyy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JNX00_06485 (orn)
Ribosome biogenesis [BR:
hyy03009
]
Eukaryotic type
Pre-60S particles
RNases
JNX00_06485 (orn)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
QRR35511
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All DBs
Position
1324104..1324691
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AA seq
195 aa
AA seq
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MTSNPADIAAPEVPTLAKSDQNLVWIDCEMSGLDPEKERLLEIAVVVTGPQLTPRIEGPV
IVVHQSDELLNAMDAWNKGTHGRSGLIDKVRASTVSEAEAEQQLIDFISRYVPKNSAPLC
GNTIGQDRRFLVKYMPRLEAYLHYRNVDVSTLKELAKRWRPEVVDAFKKRQLHTALADVH
ESIDELEHYRARFLR
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaatcccgccgacatcgccgcccccgaagtgcccacgctcgccaagagtgac
cagaacctggtctggatcgactgcgaaatgagcggtctcgatcccgagaaggagcgcctg
ctggagatcgcggtggtggtgaccggcccgcagctcacgccgcgcatcgagggccccgtc
atcgtggtccaccagagcgatgagctgctcaacgccatggatgcctggaacaagggcacg
cacggccgcagcggtctcatcgacaaggtgcgcgccagcacggtgagcgaggccgaggcc
gagcagcagctcatcgacttcatctcgcgctacgtgccgaagaacagcgcccccctgtgt
ggcaacaccatcggccaggaccgccgcttcctggtgaagtacatgccccggctcgaggcc
tacctgcactaccgcaacgtcgatgtgagcaccttgaaggaactggccaagcgctggcgc
cccgaagtggtcgacgccttcaagaagcgccagctgcacaccgccctggccgacgtgcac
gaatccattgacgaactcgagcactaccgcgcgcggtttctgcgctga
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