Hydrogenophaga sp. YM1: JNX00_07210
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Entry
JNX00_07210 CDS
T10285
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy00550
Peptidoglycan biosynthesis
hyy01100
Metabolic pathways
hyy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JNX00_07210
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JNX00_07210
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hyy01003
]
JNX00_07210
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyy01011
]
JNX00_07210
Enzymes [BR:
hyy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
JNX00_07210
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JNX00_07210
Glycosyltransferases [BR:
hyy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
JNX00_07210
Peptidoglycan biosynthesis and degradation proteins [BR:
hyy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
JNX00_07210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Rubi_NSP_C
Motif
Other DBs
NCBI-ProteinID:
QRR35641
LinkDB
All DBs
Position
complement(1500903..1503239)
Genome browser
AA seq
778 aa
AA seq
DB search
MFSTLPRRATLALALVAAIAAALPASAPAFELPSLDPIVHYQPKLPLQVLTADGEEIAQF
GAERREYVPLERIPLQLQQAVLSVEDARFREHSGVDPKGMARALVAAITGGRKQGASTIT
QQLVRTMLLTRQFSAERKAKEIWLALKLENELSKDRILEIYLNEIFLGQRAYGFAAAAQT
YFGKPLDKLTLAENAMLAGLPQNPYYANPVANLERATQRQRVVLERMRATDAITDEQLAQ
AKAEKLRLRTPGQRSVHAAHVAEMARQAVVERFGTEAYSKGLRVTTSLLAADQRAAHAAV
QRGVLAFDRRGAWRGPEDKETLPAGNGAELERAAAEALKDHRDDETLRVGIVLEASPKAL
RVQLASGERVSVQGEGLRWAQRGLDAKAKAPLKIERGAIVRVVSTGKTKDRKGDVWAISQ
WPEAEAALVSMDPRTGRIRALVGGFDFTRQPFNHVTQGWRQPGSALKPLLYSAALESRVM
PATVVDDLPFTAANGWSPSNSNGQHQGPITVREALARSSNLASVRVLQHTGTPAAREWLA
RFGLDPARQPDDLTLALGTGSVTPLQMAQAYATLANGGWRVSPVVIEKITDAQGKLLFEA
PPAAPLAEEDRAIPARNAYVMGSLLNEVTRSGTAARAQAVLKRTDVYGKTGTTNDAVDAW
FAGYQPTLAATVWVGYDQPRSLGRSESGGRAALPIWIDYMGAALKGQPVVPVPAPPEGLV
REGDDWLYAEWRDGGWVSQISDTAGTQYKTNFGGEIGKLFDSIGNWLRSGTRPTPPGE
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgaccctcccccgccgggcgacgctcgccctggcgctcgttgccgcgatcgcc
gccgcgctgccagccagcgcccccgccttcgaactcccctcgctcgaccccatcgtccac
taccagcccaagctgcccctgcaggtgctgacggccgatggcgaagagatcgcgcagttc
ggcgccgagcggcgcgagtacgtgccgctggagcgcatccccctgcagctgcagcaggcc
gtgctgtcggtggaggacgcgcgctttcgcgagcattccggcgtggaccccaagggcatg
gcgcgcgcgctggtggccgccatcaccggcgggcgcaagcagggcgcctccaccatcacg
cagcaactggtgcgcaccatgctgctcacgcgccagttctcggccgagcgcaaggccaag
gagatctggctggcgctcaagctggagaacgagctctccaaggaccgcatcctggagatc
tacctcaacgagatcttcctgggccagcgcgcctacggcttcgccgccgccgcacaaacc
tacttcggcaaaccgctggacaagctcacgctggccgagaacgccatgctcgcgggcctg
ccgcagaacccgtactacgccaacccggtggccaacctggagcgcgccacgcagcgccag
cgcgtggtgctggagcgcatgcgcgccaccgacgccatcaccgacgaacagctggcccag
gccaaggccgagaagctgcgcctgcgcacgcccggccagcgcagcgtgcacgcggcgcac
gtggccgagatggcgcggcaggcggtggtggagcgcttcggcaccgaggcctattccaag
ggcctgcgggtgaccacctcgctgctggcggccgatcagcgcgcggcacacgcggccgtg
cagcgcggcgtgctggccttcgaccggcgcggcgcctggcgcgggccggaagacaaggaa
accctgcccgccggcaatggcgccgagctggagcgcgccgccgccgaggccctgaaggac
caccgcgacgacgagaccctgcgcgtgggcatcgtgctcgaggccagccccaaggccctg
cgggtgcagctcgccagcggcgaacgcgtcagcgtgcaaggcgagggcctgcgctgggcg
cagcgcgggctcgacgccaaggccaaggcacccctcaagatcgaacgcggcgccatcgtg
cgcgtggtgagcaccggcaagaccaaggacaggaagggcgatgtctgggccatttcgcaa
tggcccgaggcggaggccgcgctcgtctccatggacccgcgcaccggccgcatccgcgcg
ctggtgggcggcttcgacttcacgcgccagcccttcaaccacgtgacgcagggctggcgc
cagccgggctcggcgctcaagccgctgctgtactcggccgcgctggagtcgcgcgtgatg
ccggccaccgtggtggacgacctgcccttcaccgccgccaatggctggagcccgtccaac
agcaacggccagcaccaggggccgatcaccgtgcgcgaggcgctggcgcgctccagcaac
ctggccagcgtgcgcgtgctgcagcacaccggcacgccggccgcgcgcgagtggctcgcc
cgcttcggcctggaccccgcgcgccagcccgacgacctgaccctggccctgggcaccggc
agcgtcacgccgctgcagatggcccaggcctacgccacgctggccaatggcggctggcgc
gtctcgccggtggtgatcgagaagatcaccgacgcgcagggcaagctgctgttcgaggcg
ccccccgctgcgccactggccgaagaagaccgcgccatcccggcgcgcaacgcctacgtg
atgggcagcctgctcaacgaggtgacgcgcagcggcaccgccgcgcgcgcgcaggccgtg
ctcaagcgcaccgacgtctatggcaagaccggcaccaccaacgacgcggtggacgcctgg
ttcgcgggctaccagcccacgctggccgccaccgtgtgggtgggctacgaccaaccgcgc
agcctgggccgcagcgaatcgggcgggcgcgcggcgctgccgatctggatcgactacatg
ggcgcggcgctcaagggccagccggtggtgccggtgcccgcgccgcccgagggcctggtg
cgcgaaggcgatgactggctgtacgccgagtggcgcgacggcggctgggtgtcgcagatc
tcggacaccgccggcacccagtacaagacgaacttcggcggcgagatcggcaagctcttc
gattccatcggcaactggctgcgcagcggcacgcggccgacgccgcccggcgagtga
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