Hydrogenophaga sp. YM1: JNX00_07495
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Entry
JNX00_07495 CDS
T10285
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
hyy Hydrogenophaga sp. YM1
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyy03009
]
JNX00_07495
Enzymes [BR:
hyy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
JNX00_07495
Ribosome biogenesis [BR:
hyy03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JNX00_07495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
MTS
Ubie_methyltran
Methyltr_RsmF_N
Methyltransf_25
GCD14
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
QRR35697
LinkDB
All DBs
Position
1562119..1563390
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AA seq
423 aa
AA seq
DB search
MHPKALLDECTALVEAVFRFDHPADAVVARHFRENKSLGPRERATLSDTVYAALRERLKF
EWLARSGSGSKWRRLAILGFSGDRDFLKSALSEPEKVWLDACAQVREDEWLAPHRHNLPQ
WLADALRAQVGEGFDELASSLLQPAPLDLRVNALKAKREAALAALRAAGLKAEPTVHSPW
GIRLQGKPSLARLPAFVNGELEVQDEGSQLLALLLDARRGEMVVDFCAGAGGKTLAIGAT
MRNTGRLYAFDTSAHRLDALKPRLARSGLSNVHPVAIAHERDERIKRLAGKIDRVLVDAP
CSGLGTLRRSPDLKWRQTPETVAAQAATQRAILDSAARLLKPGGRLVYATCSLLRDENEA
VAEAFSAAHPGFEVEPVAPLLDALRVPDAPSLCGPADEGRFLRLWPHRHGTDGFFAAVWR
KKA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaccccaaagccctgctcgacgaatgcaccgccctggtcgaggccgtgttccgtttt
gaccaccccgccgacgccgtcgtcgcccgccatttccgcgagaacaagtcgctgggcccg
cgcgagcgcgccaccctgtccgataccgtttacgccgcgctgcgtgagcgcctcaagttc
gaatggctggcgcgctcgggcagtggctccaagtggcgccgcctggccatcctgggcttc
tcgggcgaccgcgatttcctcaagagcgcgctgagcgagccggaaaaggtctggctggac
gcctgcgcccaggtgcgcgaggacgaatggctggcgccgcaccgccacaacctgccgcag
tggctggccgacgccctgcgcgcgcaggtgggcgagggcttcgacgagctggcctcgagc
ctgctgcagccggcgccgctggacctgcgggtcaacgccctgaaggccaagcgcgaggcg
gcgctcgccgcgctgcgcgccgcgggcctgaaggccgagcccacggtgcattcgccctgg
ggcatccgcctgcagggcaagccctcgctggcccggctgccggccttcgtgaacggcgaa
ctcgaggtgcaggacgaaggctcgcagttgctcgcgctgctgctcgacgccaggcgcggc
gagatggtggtggacttctgcgccggcgccggtggcaagaccctggccatcggggcgacc
atgcgcaacaccggccgcctctacgccttcgacacctcggcccatcggctcgacgcgctc
aagccgcgcctggcgcgcagcggcctgtccaacgtgcaccccgtggccatcgcgcacgag
cgcgacgagcgcatcaagcgcctggccggcaagatcgatcgggtgctggtcgacgcgccg
tgctccggcctgggcacgctgcgccgcagccccgacctcaagtggcgccagacccccgag
accgtggccgcgcaggccgccacgcagcgcgccatcctggacagcgcggcgcgcctgctc
aagcccggcgggcggctggtttacgccacctgcagcctgctgcgcgatgaaaacgaggcc
gtggccgaggccttttcggcagcgcaccccggcttcgaggttgaaccggtggcgccgttg
ctggacgccctgcgcgtgcccgacgccccgtccttgtgcggcccggccgacgaagggcgt
ttcctgcgcctgtggccccaccggcacggcaccgacggctttttcgccgccgtctggcgg
aaaaaagcttga
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