Hydrogenophaga sp. YM1: JNX00_07520
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Entry
JNX00_07520 CDS
T10285
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy02020
Two-component system
hyy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JNX00_07520
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JNX00_07520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyy03000
]
JNX00_07520
Transcription factors [BR:
hyy03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
JNX00_07520
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Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
TrmB
HVO_A0261_N
HTH_24
MarR
MarR_2
DUF7343
HTH_Cmi2_C
GntR
Rrf2
WHD_DUF6293
RepL
HTH_11
DUF7481
HTH_6
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
QRR35701
LinkDB
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Position
1566615..1567289
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AA seq
224 aa
AA seq
DB search
MSILSNLDLIRRVPLFSTLTQAQAESVADAVVKRRYKRGEMIVEQGKKSNCLAIVLTGRA
RVVTTDSRGREVILATMNPGDYVGEMSLIDNQPHSATVRAEVQTDVLILGRNEFARCLPE
NSSMAYAVMRGLVQRLRQADRKIESLALLDVYGRVARALLEQAQPGRDGQLMIRERVSRQ
DVAKMIGASREMVSRVMKDLEDRGFIEVAEDGSTIIKERLNTLG
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctgtccaatctcgacctgatccgtcgcgtgccgctgttttcaaccctcacg
caggcccaggccgaatcggtggcggacgcggtggtcaagcgccgctacaagcgcggcgaa
atgatcgtcgagcagggcaagaaatcgaactgcctggccatcgtgctcaccggccgggcc
cgggtcgtcaccaccgacagccgcggccgcgaggtcatcctggccaccatgaacccgggc
gactacgtgggcgaaatgagtctgatcgacaaccagccgcactcggccacggtgcgcgcc
gaggtgcagaccgatgtgctgatcctgggccgcaatgagttcgcgcgctgcctgcccgag
aactcttccatggcctatgccgtgatgcgcggcctggtgcagcgtctgcggcaggccgac
cgcaagattgagtccctggctctgctggacgtatacggccgcgtggcccgcgcgctgctg
gagcaggcgcagcccggacgcgacggccagctgatgatccgcgagcgagtgtcccgtcag
gacgtggccaagatgatcggcgcctcgcgcgagatggtcagccgcgtcatgaaggacctg
gaggatcggggtttcatcgaggtcgccgaggacggcagcaccatcatcaaggagcggctc
aacaccctcggttga
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