Hydrogenophaga sp. YM1: JNX00_08230
Help
Entry
JNX00_08230 CDS
T10285
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
hyy Hydrogenophaga sp. YM1
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyy03032
]
JNX00_08230
03036 Chromosome and associated proteins [BR:
hyy03036
]
JNX00_08230
03400 DNA repair and recombination proteins [BR:
hyy03400
]
JNX00_08230
DNA replication proteins [BR:
hyy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JNX00_08230
Chromosome and associated proteins [BR:
hyy03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
JNX00_08230
DNA repair and recombination proteins [BR:
hyy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
JNX00_08230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QRR35838
LinkDB
All DBs
Position
complement(1719905..1720228)
Genome browser
AA seq
107 aa
AA seq
DB search
MTRSDLVEALAARFGQLTHRDAEFAVKAILDAMGDALVKGHRIEIRGFGSFSVNRRSPRI
GRNPRSGESVMIPEKRVPHFKPGKALREQVDERTALMQQHEDQRRTG
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcagcgatcttgtcgaagccctggccgcccggttcggccagctcacccaccgc
gatgccgagttcgccgtcaaggcgatcctcgacgccatgggcgatgccctggtgaagggc
caccgcatcgagatccggggcttcggcagtttctcggtcaatcgccgctcgcctcgcatc
ggacgcaacccgcgttcgggcgagagcgtgatgattcccgagaagcgcgtgccccacttc
aagcccggcaaggccttgcgcgagcaggtcgacgagcgcaccgccctcatgcagcagcac
gaggaccagcgacgcaccggctga
DBGET
integrated database retrieval system
