KEGG   Hydrogenophaga sp. YM1: JNX00_08780
Entry
JNX00_08780       CDS       T10285                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
hyy  Hydrogenophaga sp. YM1
Pathway
hyy03030  DNA replication
hyy03430  Mismatch repair
hyy03440  Homologous recombination
Brite
Enzymes [BR:hyy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JNX00_08780 (dnaE)
DNA replication proteins [BR:hyy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JNX00_08780 (dnaE)
DNA repair and recombination proteins [BR:hyy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JNX00_08780 (dnaE)
SSDB
Other DBs
NCBI-ProteinID: QRR35933
LinkDB
Position
1841154..1844723
AA seq 1189 aa
MFVHLRLHTEFSVVDGTNRIDEVMAAAAADGQPALAITDLSNLFGAVKFYRAGRDAGVKP
VIGAEVLLQGFTEETPNAMPGAHQPPLPRVLLLVQDKQGYLNLSELLARAWTRNVVRDQA
VIKREWLEELNAGLILLSGAQAGPVGQALMAGDPQRASDAALNLATLFPHRFYIEVQRAG
RADDERHVVAAAQLAARLRLPVVATHPVQFLRPDDYESHEARVCIAEGEILANNRRVRRF
TREQWFKPAADMSALFADLPSAVANTAEIAKRCNLTLVLGKPQLPNFPTPLIDGVPMPME
DFFRQSSFEGLEERLAHLYPDEAEREKQRPRYVERLEFEIGTILKMGFPGYFLIVGDFIN
WAKNNGCPVGPGRGSGAGSLVAYALKITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQG
NRDRVIEYVKQKYGKDAVSQIATFGTMAARAAIRDVGRVLDLSYGFCDGISKLVPNKPGM
SVTLQYPPVPKKEGDKNNYALEMEPLLAERVRQEEDVKTLIELAQKLEGMTRNVGMHAGG
VLIAPGKLTDFCPLYAQPGSDSAVSQYDKDDVEAIGLVKFDFLGLATLTILEIAREFIMK
RHKGQENFRFEDVRLDDPKVYALFSRGQTEAVFQFESRGMQGMLRDAKPTRLEDLIALNA
LYRPGPMDLIPSFVARKHGREAVEYPHPAVADMLSETYGIMVYQEQVMQTAQILGGYSLG
GADLLRRAMGKKKAEEMAEHREKFRAGALKTHGIPQDKADEVFDLMEKFAGYGFNKSHAA
AYSLLAYHTGWLKVHYTAEFYCANMTVEMDDTDKLKVLFEDAQKMGMAFEPPDVNRGVYR
FEPVTDKLIRYGLGAIKGTGQQAIEAIVAAREGRGEGPNGGESGPFKSLFDFCLRVDRTR
LNKRTVEALIKAGAFDALHLNRAELLATLDIAFEYAATTQANAHQGGLFDMLGGDDHGSS
TQEPDLVAAMPWGVKEKLTHEKSAIGFYFSGHLFDEVEREVRRFARTRLVDVVDSRDPVI
LAGIVTDFRVINGQRGKLALFKIDDKTGVLETSADENLINTHRALLKDDELIVVQAVAQP
DRFSGGLRLKIQQVWDLASARCRFGKYLRVAVNGHAPSVAQLVRDFPPKREMSDQGEFVR
GLPVRLALQRDGARCELQLDDRALFFPTDAALASWMAQAHEQRAEIVFD
NT seq 3570 nt   +upstreamnt  +downstreamnt
atgtttgttcacctgcgcctgcacaccgagttttccgtcgtcgacggcaccaaccgcatc
gatgaggtgatggccgccgccgcggccgacggccagcccgcgctggccatcaccgacctc
agcaacctcttcggcgccgtcaagttctaccgcgccgggcgcgacgccggcgtcaagccc
gtcatcggcgccgaggtgctgctgcaaggcttcaccgaggaaaccccgaacgccatgccc
ggcgcccaccagccgccgctgccgcgcgtgctgctgctggtgcaggacaagcagggctac
ctgaacctgagcgagctgctggcgcgcgcctggacgcgcaacgtggtgcgcgaccaggcc
gtgatcaagcgcgaatggctcgaagagctcaacgcgggcctgatcctgctgtcgggcgcg
caggccggcccggtggggcaggcgctgatggccggcgatccgcagcgcgcgagcgacgcc
gccctgaacctggccaccctgttcccgcaccgcttctacatcgaggtgcagcgcgccggg
cgcgccgacgacgaacgccacgtggtcgcggccgcgcagctggccgcgcggctgcgcctg
ccagtggtggccacgcacccggtgcagttcctgcggcccgacgactacgagtcgcacgag
gcgcgcgtgtgcatcgccgagggcgagatcctggccaacaaccggcgcgtgcgccgtttc
acgcgcgagcagtggttcaagcccgccgccgacatgagcgcgctgttcgccgacctgcca
tcggccgtggccaacacggccgagatcgccaagcgctgcaacctcacgctggtgctgggc
aagccgcagctgcccaacttccccacgccgctgatcgatggcgtgcccatgcccatggag
gacttcttccgccagtcctccttcgagggcctggaggagcgcctggcgcacctgtacccc
gacgaagccgagcgcgagaagcagcgcccgcgctacgtggagcgcctggagttcgagatc
ggcaccatcctcaagatgggcttcccgggctacttcctcatcgtgggcgacttcatcaac
tgggccaagaacaacggctgcccggtggggccgggccgcggctcgggcgcgggctcgctg
gtggcctacgcgctcaagatcaccgacctcgacccgctgcaatacaacctgctgttcgag
cgcttcctcaacccggagcgggtgtccatgcccgacttcgacatcgacttctgccagggc
aaccgcgaccgcgtcatcgagtacgtgaagcagaaatacggcaaggacgcggtgagccag
atcgccaccttcggcaccatggccgcgcgcgcggccatccgcgacgtgggccgcgtgctc
gacctgtcctacggtttctgcgacggcatctccaagctggtgcccaacaagcccggcatg
agcgtgaccctgcagtacccgcccgtgcccaagaaagagggcgacaagaacaactacgcg
ctcgagatggagccgctgctggccgagcgcgtgcgccaggaagaagacgtcaagaccctg
atcgagctggcacagaagctcgagggcatgacccgcaacgtgggcatgcacgcgggcggc
gtgctgatcgcgcccggcaagctcaccgacttctgcccgctgtacgcgcagcccggcagc
gactcggccgtgagccagtacgacaaggacgacgtcgaggcgatcggtctggtgaagttc
gacttcctgggcctggccacgctcaccatcctggaaatcgcgcgcgagttcatcatgaag
cgccacaaggggcaggagaacttccgcttcgaggacgtgcggcttgacgatcccaaggtc
tatgccctgttctcgcgtggccagaccgaagccgtgttccagtttgaaagccgcggcatg
cagggcatgctgcgcgacgccaagcccacgcgcctggaggacctgatcgcgctcaacgcg
ctgtaccggccgggcccgatggacctgatccccagcttcgtggcgcgcaagcacgggcgc
gaggcggtggagtacccgcacccggccgtggccgacatgctcagcgagacctacgggatc
atggtctaccaggagcaggtgatgcagacggcgcagatcctgggcggctactcgctcggc
ggcgccgacctgctgcgccgcgccatgggcaagaagaaggccgaggagatggccgagcac
cgcgagaaattccgcgccggtgcgctcaagacccacggcatcccgcaggacaaggccgac
gaggtcttcgacctgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggcc
gcgtactcgctgctggcctaccacacgggctggctcaaggtgcactacacggcggagttc
tactgcgccaacatgaccgtggaaatggacgacaccgacaagctcaaggtgttgttcgag
gacgcgcagaagatgggcatggccttcgagccgcccgacgtgaaccgcggcgtctaccgc
ttcgagccggtgaccgacaagctcatccgctacggtctgggcgccatcaagggcacgggc
cagcaggccatcgaggccatcgtggccgcgcgcgagggccgtggcgaaggccccaacggc
ggcgagagcggtccgttcaagagcctgttcgacttctgcctgcgcgtggaccgcacgcgc
ctgaacaagcgcacggtggaagccctcatcaaggccggcgccttcgacgccctgcacctg
aaccgcgccgagctgctggccacgctggacatcgccttcgagtacgcggccaccacgcag
gccaacgcgcaccagggcgggctgttcgacatgctgggcggcgacgaccatggctccagc
acgcaggagcccgacctggtcgcggccatgccctggggcgtgaaggaaaagctcacgcac
gagaagagcgccatcggcttctacttctcgggccacctgttcgacgaggtggagcgcgag
gtgcgccgcttcgcgcgcacgcgcctggtggacgtggtggacagccgcgacccggtgatc
ctcgcgggcatcgtgacggacttccgcgtcatcaatggccagcgcggcaagctcgcgctg
ttcaagatcgacgacaagaccggcgtgctggaaaccagcgccgacgagaacctcatcaac
acgcaccgcgcgctgctcaaagacgacgagctgatcgtggtgcaggcggtggcgcagccg
gaccgcttctcgggcggcctgcgcctgaagatccagcaggtctgggacctggccagcgcg
cgctgccgcttcggcaagtacctgcgcgtggcggtgaacgggcacgcgccgtccgtggcg
cagctggtgcgcgacttcccgcccaagcgcgagatgagcgaccagggcgagttcgtgcgc
ggcctgccggtgcgcctggccttgcagcgtgacggcgcgcgctgcgagctgcagctggac
gatcgcgcgctgtttttcccgacggacgcggcgctggcgagctggatggcccaggcgcac
gagcagcgcgcggagatcgtgttcgattga

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