Hydrogenophaga sp. YM1: JNX00_09005
Help
Entry
JNX00_09005 CDS
T10285
Symbol
istA
Name
(GenBank) IS21 family transposase
Organism
hyy Hydrogenophaga sp. YM1
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
HTH_23
HTH_29
HTH_28
Sigma70_r4_2
HTH_17
R2K_2
HTH_Tnp_ISL3
Sf6_terminase
MerR_1
HTH_38
DUF1441
TnsB_C
TnsD
HTH_Tnp_IS630
DUF4638
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
QRR35972
LinkDB
All DBs
Position
1889203..1890699
Genome browser
AA seq
498 aa
AA seq
DB search
MGMLAKIRRMHLRDGKSIREISRVTGLSRNTVRGWLRQQDVTEPKYPKRSEVSVVDAWAQ
HLEAALRTDQHRAARERRTAKGLFEQIRALGDKGSYPRVAVWVRRWREQQANAPRRAAFV
PMSFELGDAFQFDWSCEYVFVGGLRRRLEVAHTKLAASRAFWLTAYPAQSHEMLFDAHAR
AFAAFGGVPRRGIYDNMKTAVDKVGTGKARSVNVRFAAMCSHYLFDAEFCNPASGWEKGV
VEKNVQDRRRQVWREAAERRWADLEALNTWLGERCRQCWEDSAHPEWPELTVAEVFQDEQ
ARLMPCPKPFDGYVEQPVRVSATGLIHFQRNRYSVPTRHVNAILSLRVYPRELVLVAEGV
EVARHVRCFEREQTVYDWRHYIDLVQTKPGALRNGAPFKTMPEALQALQRHLLRHAGGVR
VMTQVLAAVPVHGLEAVIVAAEVALEAQRPSAEHVLNVLARLKEGLPVLQPLEANTPALR
EEPRADVQRYDRLREVRA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
gtgggcatgttggccaagatcaggcgaatgcacctgagggatgggaagtccatccgggag
atcagccgagtcaccgggctgtccaggaatacggtgagagggtggttgcgccagcaggac
gtgaccgagccgaagtaccccaagcgaagcgaggtcagcgtcgtggacgcctgggcgcag
cacctggaggcggcgctgcgaaccgaccagcaccgcgcggcgcgcgagcggcgcaccgcc
aaggggctgttcgagcagatccgcgcactcggcgacaagggcagctacccgcgggtggcg
gtgtgggtgcgccgctggcgcgagcagcaagccaacgcgccccggcgcgcggcgttcgtg
ccgatgagcttcgagctgggcgatgcgttccagttcgactggagctgcgagtacgtcttc
gtgggtggcctgcgccggcgcctggaggttgcgcacaccaagctggccgcctcgcgcgcg
ttctggctcacggcctacccggcgcaaagccacgagatgctgttcgatgcccacgcccgg
gcgtttgccgccttcggcggagtgccgcggcgcggcatctacgacaacatgaagaccgct
gtggacaaggtgggaacgggcaaggcccgcagcgtgaacgtgcgctttgccgccatgtgc
tcgcactacctgttcgatgcagagttctgcaacccggcctcgggttgggagaagggggtg
gtggagaagaacgtgcaggaccggcgccgccaggtctggcgcgaggccgccgagcggcgc
tgggcggatctggaggcgctcaacacctggctgggcgagcgctgccgccagtgctgggag
gacagtgcccaccccgagtggcccgagctcaccgtggccgaggtgttccaggacgagcag
gcgcgcctcatgccttgcccaaagccctttgatggctatgtcgagcaaccggttcgggtc
tcggccaccgggctgatccacttccagcgcaaccgctacagcgtgcccacccgccacgtg
aacgcgatcctgagcctgcgggtgtacccgcgcgagctcgtgctggtggctgaaggggtg
gaggtggcgcgccatgtgcgctgcttcgagcgcgagcagactgtctacgactggcgccac
tacatcgatctggtgcagaccaagcccggggcgctgcgcaacggcgcaccgttcaagacc
atgcctgaggcgctgcaggcgctgcagcggcacttgctgcgccacgccggtggagtccgg
gtgatgacgcaggtgctcgccgctgttcccgtgcacggcctggaagcggtgatcgtggct
gcggaggtggcgctggaggcgcagcgcccaagcgccgagcacgtgctcaacgtgctggcc
cgcctcaaggagggcttgcctgtgctgcagccgctggaggcgaacaccccggcgctgcgg
gaggagccgcgtgctgacgtgcagcgctacgaccggctgcgggaggtgcgcgcatga
DBGET
integrated database retrieval system
