Hydrogenophaga sp. YM1: JNX00_10270
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Entry
JNX00_10270 CDS
T10285
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy02020
Two-component system
hyy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JNX00_10270
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JNX00_10270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyy03000
]
JNX00_10270
Transcription factors [BR:
hyy03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
JNX00_10270
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Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HTH_11
Sigma70_r4
HTH_46
HTH_69
HTH_29
HTH_IclR
HTH_23
MarR_2
HTH_24
TrmB
MarR
HTH_28
HTH_Tnp_4
Rrf2
FeoC
HTH_6
HVO_A0261_N
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QRR36208
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Position
2208214..2208864
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AA seq
216 aa
AA seq
DB search
MPPASASTLSSQNTQHIEALAAQGIQRRYRRGALLIQEGETGDTLYIVLQGRLRAYVADA
SGRELTLGLYGPLEYVGEMSLDGGPRSANVEAAEASTCSVITRERLLAYIAEHPEFAFEL
MARLIRRARLATESARSVALIDVYGRLVKLLNGWALAPQDDGARPLRERLTHQQIAQHLA
CSREMVSRLLKDLENGGYVAVRERRLWLLKNLPARW
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgccccccgccagcgcttcgacactctcttcgcagaacacgcagcacatcgaagcactg
gccgcgcaaggcatccaacgccgctaccggcgcggcgccctgctgattcaggaaggcgaa
accggggacaccctctatatcgtgctgcagggccgcttgcgcgcctatgtggccgacgcc
tccggccgcgaactcaccctgggcctgtacggccccctggaatacgtgggcgagatgtcg
ctcgacggcggcccgcgctcggccaacgtggaggcggccgaggccagcacctgctcggtc
atcacgcgcgagcgcctgctggcctacatcgccgagcacccggaattcgccttcgagctc
atggcgcgcctgatccggcgcgcccgcctggccaccgaaagcgcgcgcagcgtggcgctg
atcgacgtctacggccgcctggtgaagctgctcaacggctgggcgttggcgccgcaggac
gacggcgcgcgcccgctgcgcgagcggctgacgcaccagcagatcgcccagcacctggcc
tgctcgcgcgagatggtgagccggctgctgaaggacctggagaacggcggctacgtcgcc
gtgcgcgagcggcgcctctggttgctgaagaacctgccggcgcgctggtga
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