Hydrogenophaga sp. YM1: JNX00_11000
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Entry
JNX00_11000 CDS
T10285
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hyy Hydrogenophaga sp. YM1
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hyy03016
]
JNX00_11000 (truB)
Enzymes [BR:
hyy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JNX00_11000 (truB)
Transfer RNA biogenesis [BR:
hyy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JNX00_11000 (truB)
Prokaryotic type
JNX00_11000 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QRR36343
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All DBs
Position
2356948..2357922
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AA seq
324 aa
AA seq
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MQRQRTRVQRRPVHGVLLLDKPLGLSSNQALQKAKWLLRAEKAGHTGTLDPLATGVLPLC
FGAATKFSQLHLDADKTYETTVRLGVRTRTADAEGEVIDTRPVSCSAGQVVEVLDRFMGE
IDQVPPMHSALKKDGKALYEYAREGETVAREPRRVRIHEIELLDMRLQGEAPQLRLRVVC
SKGTYIRTLGEDIGEALGCGGHLIALRRVATGPFGVADAVTLDALEAMGEAERLGALKPV
EALLEGHERIALDAEHAGRFLSGVRRRGDWPNRERVAVFGPSPANPTPTVLLGTAHVQGG
ELIPGRLLSPTDIQQILETEAPAP
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccaacgcacgagggtgcaacggcgccccgtgcatggggtgctgctgctcgac
aaaccgctgggcctgtccagcaaccaggccttgcagaaggccaagtggctgctgcgcgcc
gaaaaagccggccacaccggcacgctcgaccccctggctacgggcgttctgccgctgtgt
tttggcgcggccaccaagttcagccaactgcacctggacgccgacaagacctacgaaacc
accgtgcgactgggcgtgcgcacgcgcacggccgacgccgagggcgaggtcatcgacacc
cgccccgtgtcgtgctccgccggccaggtggtggaggtgctggaccgcttcatgggcgag
atcgaccaggtgccgcccatgcacagcgcgctcaagaaggacggcaaggccctgtacgaa
tacgcgcgcgaaggcgagaccgtggcgcgcgagccgcgccgcgtgcgcatccacgagatc
gagctgctcgacatgcggctgcagggcgaggccccccagctgcgcctgcgcgtggtctgc
agcaagggcacctacatccgcacgctcggcgaagacatcggcgaggccctgggctgcggc
ggccacctgatcgcgctgcgccgcgtggccaccggaccattcggcgtggccgacgccgtc
acgctcgacgcactcgaggcgatgggcgaagccgagcggctgggcgccctgaaaccggtc
gaggccctgctcgagggccatgaacggatcgcgctcgacgccgagcacgccgggcgcttc
ctgagcggcgtgcgccgccgtggcgactggcccaaccgcgagcgcgtggccgtcttcggc
ccttcgcccgccaaccccacgcccaccgtcctgctgggcaccgcccacgtacagggcggc
gaactcatcccggggcgcctgttgagccccaccgatatccagcaaatcctcgaaacagag
gcacccgcaccatga
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