Hydrogenophaga sp. YM1: JNX00_12135
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Entry
JNX00_12135 CDS
T10285
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
hyy Hydrogenophaga sp. YM1
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyy03000
]
JNX00_12135
Transcription factors [BR:
hyy03000
]
Prokaryotic type
Helix-turn-helix
AraC family
JNX00_12135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QRR32439
LinkDB
All DBs
Position
2595576..2596463
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AA seq
295 aa
AA seq
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MARSMAREAPVNPLQERNLLSAQAVSRWAGLPIGWVQAVPEVAGSCETAGQTLLALLECG
QAQAEFHYGARSFGFDLGAGAMGLFTPGGHADVSRWRCQGVRRIMLQFDHAGLADPVLSD
QLARMPLRPELEFHDDGLASVLRAMVREVAEGCPSGTLFAESLSLGVAMRLQERAARRHA
PARERGRLSLAQARRVEDLVRVRLAQALTIGDLAQAAGFSRTQFVRLFKNTFACTPYQYV
LDMRLQRARTLVMGGDAPLAGIADETGFSSQSHMTTAFLRAFGATPGELRRAGRC
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctcgatcaatggcgcgcgaggcgccggtcaaccccttgcaggagcgcaacctgctc
agcgcacaggctgtgtcgcgctgggctggccttcccatcggatgggtacaggcggtgccc
gaagtggcgggttcgtgcgagacggccggccagaccttgctggccctgctcgagtgcggt
caggcgcaggccgagttccactacggcgcgcgcagcttcggcttcgatctgggggcaggc
gccatgggcctgttcacgcccggcggtcatgcggacgtatcgcgctggcgctgccagggg
gtgcggcgcatcatgctgcagttcgatcacgcgggactggccgacccggttctgtcggat
cagctggcgcgcatgccgctcaggcccgagctggaattccacgacgatggcctcgcctcg
gtactgcgcgccatggtgcgtgaggtggccgagggttgccccagtggcacgttgttcgcc
gaatcactttccctgggtgtggccatgcggctgcaggagcgtgcggcccgacggcacgca
cccgcgcgcgaacgcggcaggctgtcgctggcccaggcacgccgcgtggaggatctggtg
cgcgtgcgccttgctcaggcgctgacgatcggtgatctcgcgcaggctgccggcttcagc
cgaacgcagtttgtgcggcttttcaagaacacgtttgcctgtacgccttaccagtacgtt
ctcgacatgcgtttgcagcgcgcgcgcacactcgtgatgggcggcgatgcgccgctggcc
ggcatcgctgatgagactggcttttcgagccagagccacatgacgaccgccttcttgcgc
gctttcggtgcaacaccgggtgagctgcggcgcgcagggaggtgttaa
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