Hydrogenophaga sp. YM1: JNX00_12895
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Entry
JNX00_12895 CDS
T10285
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
hyy Hydrogenophaga sp. YM1
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hyy03036
]
JNX00_12895 (smc)
Chromosome and associated proteins [BR:
hyy03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
JNX00_12895 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
SMC_hinge
AAA_15
ABC_tran
AAA_29
SPAM
PUMA_CC
PSF1_C
DUF1664
Motif
Other DBs
NCBI-ProteinID:
QRR32578
LinkDB
All DBs
Position
complement(2752115..2755633)
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AA seq
1172 aa
AA seq
DB search
MRLNSIKLSGFKSFAEPTNFMLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES
MQDVIFNGTTSRKQASRASVELVFDNSDHRAGGQWGQFTEIAVKRVLTRDGTSSYYINNQ
PVRRRDVQDVFLGTGLGPRAYAIIGQGTISRIIESKPEELRLFLEEAAGVSKYKERRRET
AHRLADTRENLTRVEDILRELNANLDKLEKQAEVAAQYHALNASATLKQHQLWFLKRADA
EAEQARVQKDAAQAATDLESRTADLRRIESELETIRQAHYAAGDQVNQAQGKLYEASAEV
GKLEAEIRFVVEGRQRVEQRLAQLKEQIASWSTRSQDAAVELEQLAENIVGAEEQSVVLA
AQGEEQAGALPALDDALRAAQARSAEQRTAVTQVQQQIQVLAAEQRSIEEQTRGLSQRRE
RLAADKNALAAPDEARVSAAQQAMATAQSLAEETDARLHELQDSVPQLDDARRQAQAAVN
AESAKQADLSARLEALKALQEKVRTDGKLKPWLSKHGLDGLQGLWSRIHVEAGWENALEA
ALRERLGALEVSRLEMVRAFASDAPPTRLAFYQPPPAGAANEGNGALKPLASWLRLNDAA
QQALLGDWLRGCYSAATLDEALAQRGQLQPGETLYVASGHAVSAHSVSFYAPDNEQAGLL
ARAQEIENLDKQLKAQALIAEQARSALVRADAAFTDASQRLVVARREAAEAQSRSHELQV
EAMRLTQQAEQTRARSEQINADLAEVDAQLEALQERRVTAEARFEELDMQLADSQERHAQ
LDDAVIEAERKLNHAREQQRALERQAQEATFSLRSLQARQAELQRSIDTAGQQEQSLADE
QRRAQDELSRLTDAAAQAGLQSALAAKTEREQALAALRSQYDDLTMKLRASDERRLQLER
ELEPLRSRITDFQLKEQAARLGVEQYSQMLDEAEADRAAIAQSITEGNVRLAGLQGEIDR
LHRDIQALGAVNLAALDELTAARERKTFLDAQTADLNEAITTLEDAIKKIDNETRELLGS
TFETVNQHFGKMFPELFGGGNARLVMTGEEILDAGVQVMAQPPGKKNQTIHLLSGGEKAL
TAIALVFAIFQLNPAPFCLLDEVDAPLDDANTERYAKLVSAMAKETQFLFISHNKIAMEM
AQQLIGVTMQEQGVSRIVAVDMESAAGMMEAT
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctcaattccatcaagctttccggcttcaagtccttcgccgaacccaccaacttc
atgctgcccggccaactcgtgggcgtggtgggccccaacggttgcggcaagtccaacatc
atggacgcggtgcgctgggtgctgggcgaatccaaggcctccgagctgcgtggcgagtcc
atgcaggacgtgatcttcaacggcaccaccagccgcaagcaggccagccgcgccagcgtg
gaactggtgttcgacaacagcgaccaccgcgccggcggccaatggggccagttcaccgag
atcgccgtcaagcgcgtgctgacgcgcgacggcaccagcagctactacatcaacaaccag
cccgtgcgccggcgcgacgtgcaggacgtgttcctgggcaccggcctgggcccgcgcgcc
tacgccatcatcggccagggcaccatcagccgcatcatcgagagcaagcccgaggagctg
cgcctgttcctggaggaggccgccggcgtctccaaatacaaggagcgccgccgcgagacc
gcgcaccgcctggccgatacgcgcgagaacctgacgcgggtggaagacatcctgcgcgaa
ctcaacgccaacctcgacaagctggagaagcaggccgaggtggcggcccaataccacgcg
ctgaacgccagcgccacgctcaagcagcaccagctgtggttcctcaagcgcgccgacgcc
gaggccgagcaggcccgcgtgcagaaggacgccgcccaggccgcgaccgacctggagtcg
cgcacggccgacctgcgacggatcgaaagcgagctggagaccattcgccaggcccactac
gcggcgggtgaccaggtgaaccaggcgcagggcaagctgtacgaggccagtgccgaggtc
ggcaagctggaggccgagatccgtttcgtggtggaaggccgccagcgcgtggagcagcgc
ctggctcagctgaaggagcagatcgcctcctggtccacgcgcagccaggacgccgccgtg
gagctggagcaactggccgagaacatcgtcggtgccgaggagcagtccgtggtgctggcc
gcccagggcgaggagcaggccggcgcgctgcccgcgctggacgacgcgctgcgcgccgcg
caggcccgttccgccgagcagcgcacggcggtcacccaggtgcagcagcagatccaggtg
ctggcggccgagcagcgcagcatcgaagaacagacgcgcggcctgagccagcgccgcgag
cgcctggccgccgacaaaaacgccctggccgcgcccgacgaggcgcgcgtcagcgcggcc
cagcaggccatggccacggcccagtccctggccgaggaaaccgacgcccgcctgcacgag
ctgcaggacagcgtgccccagctcgacgacgcgcgccgccaggcgcaggcggcggtgaac
gccgagtccgcgaaacaggccgacctgagcgcgcgcctggaggccctgaaggccctgcaa
gagaaggtgcgcaccgacggcaagctcaaaccctggctgagcaagcacgggctcgacggc
ctgcagggcctgtggagccgcatccatgtggaggccggctgggagaacgccctggaggcc
gccctgcgcgagcgcctgggcgcgctggaagtgtcgcgcctggagatggtgcgcgccttc
gccagcgacgcgccgcccacccgcctggccttctaccagccgccgccggccggcgccgcg
aacgagggcaacggcgcgctcaagcccctggccagctggctgcgcctgaacgacgccgcc
cagcaggccctgctgggcgactggctgcgcggctgctacagcgccgccacgctggacgag
gccctggcccagcgcggccagttgcagcccggcgagaccctctatgtcgccagcggccac
gccgtcagcgcccacagcgtgagcttctacgcgcccgacaacgagcaggccggcctgctg
gcgcgcgcgcaggagatcgagaacctggacaagcagctcaaggcccaggcactgatcgcc
gagcaggcgcgctcggccctggtgcgcgccgacgccgcgttcaccgacgcctcgcagcgc
ctggtggtggcgcgccgcgaggccgccgaggcgcagagccgctcgcacgagctgcaggtc
gaggcgatgcgcctgacccagcaggccgagcagacgcgcgcgcgcagcgagcagatcaac
gccgacctcgccgaggtcgacgcccagctcgaagccctgcaggagcgccgcgtgaccgcc
gaggcgcgcttcgaggaactggacatgcagctggccgacagccaggagcgccacgcccag
ctcgacgacgccgtgatcgaggccgagcgcaagctcaatcacgcgcgcgagcagcagcgc
gcgctggagcgccaggcgcaggaggccaccttctcgctgcgcagcctgcaggcgcgccag
gccgagctgcagcgttccatcgacaccgccggccagcaggaacagtcgctggccgacgag
cagcggcgcgcgcaggacgagctctcgcgcctgaccgacgccgccgcgcaggccggcctg
cagtccgcgctggccgccaagaccgagcgcgaacaggccctggccgcgctgcgcagccag
tacgacgacctcaccatgaagctgcgcgccagcgacgagcgccgcctgcagctcgagcgc
gagctggagccgctgcgcagccgcatcaccgatttccagctcaaggagcaggccgcgcgc
ctgggcgtggagcaatacagccagatgctcgacgaggccgaggccgaccgcgcggccatc
gcgcagagcatcaccgaaggcaatgtgcgccttgccggcctgcagggcgagatcgaccgc
ctgcaccgcgacatccaggcgctgggcgcggtcaacctcgccgcgctggacgaactcacc
gccgcgcgcgagcgcaagaccttcctggacgcgcagaccgccgacctcaacgaggccatc
accacgctggaagacgcgatcaagaagatcgacaacgaaacgcgcgagctgctcggctcc
accttcgagaccgtcaaccagcacttcggcaagatgtttcccgagctgttcggcggcggc
aacgcccgcctggtgatgaccggcgaggagatcctggacgccggcgtgcaggtgatggcc
cagccgcccggcaagaagaaccagaccatccacctgctgtccggcggcgagaaggcgctc
accgccattgccctggtgttcgccatcttccagctcaaccccgcgccgttctgcctgctg
gacgaggtggacgcaccgctggacgacgccaacaccgagcgctacgccaagctggtgagc
gccatggccaaggaaacgcagttcctcttcatcagccacaacaagatcgcgatggagatg
gcccagcagctcatcggcgtgaccatgcaggagcagggcgtctcgcgcatcgtggcggtg
gacatggagtccgccgccgggatgatggaagccacttga
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