Hydrogenophaga sp. YM1: JNX00_13165
Help
Entry
JNX00_13165 CDS
T10285
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JNX00_13165 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyy03400
]
JNX00_13165 (xseA)
Enzymes [BR:
hyy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
JNX00_13165 (xseA)
DNA repair and recombination proteins [BR:
hyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JNX00_13165 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
SSB
Motif
Other DBs
NCBI-ProteinID:
QRR32626
LinkDB
All DBs
Position
complement(2810077..2811375)
Genome browser
AA seq
432 aa
AA seq
DB search
MKPQRVADGPGGARFWAVGALVRAVADALASRFNPVAVQGEISGFSRAASGHCYFSLKDD
AGQLRCAMFRRAAEQVGFPVRDGQRVQVQGRLDVYGPRGDLQLIVESLRLAGQGSLYEQF
LQLKAALQAEGLFDAERKRPLPAQPRHIGVVTSLGAAALRDVATALRRRVPHIPVTVFPA
SVQGAQAPAELVAALAAAAAHRGPRGACDVLLLVRGGGSLEDLWAFNDAAVVRAVAASPV
PVVVGVGHETDFSLADFAADLRAPTPTAAAELCAPDRRQRELELERLQGLLRQGVQDALD
GRAQRLDRLAAHLGRPSARLAQAGEQLARWQGRLHKGMALAVQRQHWRLDELQARLPPAL
RRGLDARAQRLQRAEDSLALLDPRLVLQRGYAYLTDPQGQAITRVAQALPGSDVQATLAD
GVLPLRVRGPGA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccacaacgcgtggccgacggcccaggcggcgcgcgtttctgggcggttggcgcg
ctggtgcgagcggtggcggacgccttggcttcgcgcttcaatcccgtcgcggtccagggg
gagatttcgggcttctcgcgcgcggccagcgggcattgctacttctcgctcaaggacgac
gctggccagctgcgctgcgccatgttccgccgcgcggccgaacaggtgggcttcccggtg
cgcgacggccagcgcgtgcaggtgcaaggccggctggacgtctacggcccgcgcggcgac
ctgcagctgatcgtggaaagcctgcgcctggccgggcagggcagcctgtacgagcagttc
ctgcagctgaaggccgcgctgcaggccgagggcttgttcgacgccgaacgcaagcggccg
ctgcccgcccagccgcggcacatcggcgtggtcacctcgctgggcgcggccgccctgcgc
gacgtggccaccgccttgcgccggcgcgtgccgcacatcccggtgacggtgtttcccgcc
tcggtgcagggggcgcaggccccggccgagctggtggccgcgctggccgcggcggcggcg
caccgcggcccgcgcggcgcctgcgacgtgctgctcctggtgcgcggcggcggctcgctc
gaagacctctgggcgtttaacgacgcggccgtggtgcgcgcggtggcggcctcgcccgtg
cccgtggtggtgggcgtgggacacgagaccgatttcagcctggccgacttcgccgccgac
ctgcgcgcgcccacgcccaccgcggcggccgagctctgcgcgcccgaccggcgccagcgc
gaactcgaactggagcgcctgcagggcctgctgcgccagggcgtgcaggacgcgctcgat
ggtcgcgcgcagcggctcgaccggctcgcggcccacctgggccggccttcggcccgcctg
gcgcaggcgggcgagcaactggcgcgctggcaggggcggctgcacaagggcatggcgctc
gcggtgcagcgccagcattggcggctcgacgaactgcaggcccgcctgccgcccgccctg
cggcgcggcctggacgcgcgcgcgcaacgcctgcagcgcgccgaggactcgctggccctg
ctcgatccgcgcctggtgctgcagcgcggctacgcctacctgaccgatccgcaaggccag
gccatcacccgcgtggcacaggctttgccggggagcgacgtgcaggccacgctggccgat
ggcgtgctgccgctgcgcgtgcgcgggcctggcgcatag
DBGET
integrated database retrieval system
