Hydrogenophaga sp. YM1: JNX00_13545
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Entry
JNX00_13545 CDS
T10285
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
hyy Hydrogenophaga sp. YM1
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyy03009
]
JNX00_13545 (der)
Ribosome biogenesis [BR:
hyy03009
]
Prokaryotic type
GTPases
JNX00_13545 (der)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
MeaB
cobW
AAA_22
ABC_tran
Ras
Motif
Other DBs
NCBI-ProteinID:
QRR32693
LinkDB
All DBs
Position
complement(2883082..2884422)
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AA seq
446 aa
AA seq
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MKPVVALVGRPNVGKSTLFNRLTGTRDAIVADLAGLTRDRHYGNGRLGKREYIVVDTGGF
EPDAGEGSIYREMAQQTRQAVAESDVVLFVVDARAGLSAQDHDIANYLRRLGKPCVLVAN
KAEGMTQGAQLVEFFELGLGEVLPVSGAHGQGVRSMIETALDRVPGLAEDEEGEAEDNTG
TIRLTVAGRPNVGKSTLINAWLGEERLVAFDMPGTTRDAISVPFERNGQRFELVDTAGLR
RKGRVFEAIEKFSVIKTLQAIENANVVLLLLDATQGVTDQDAHIAGYILESGRAVVVAIN
KWDAIDSYQREQLERQIENRLAFLKFAALHRISAKKRQGLAPLWASIAQAHASAMRKMPT
PVLTRLLQEAVAFQAPSRGGQARPKMRYAHQGGMNPPVIVIHGNSLDRVPDAYRRFLEGR
FRKAFDLVGTPLRIEFRTSSNPFKAE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccgtcgtcgcgctcgtgggccgccccaatgtgggcaagtccaccctgttcaac
cgcctcacgggcacacgcgacgccatcgtggccgacctggccggcctcacgcgcgaccgc
cactacggcaatggccgcctgggcaaacgcgagtacatcgtcgtcgacaccggcggcttc
gagcccgacgccggcgagggcagcatctaccgcgaaatggcgcagcagacgcgccaagcc
gtggccgaaagcgacgtggtgctcttcgtggtcgacgcgcgcgccggcctgagcgcgcag
gaccacgacatcgccaactacctgcgccgcctgggcaagccctgcgtgctggtggccaac
aaggccgagggcatgacccagggcgcccagctggtggagttcttcgaactcggcctgggc
gaagtgctgcccgtgtcgggcgcgcacgggcagggcgttcgctccatgatcgagaccgcc
ctcgatcgagtccccggcctggccgaggacgaggaaggcgaggccgaggacaacaccggc
accatccgcctgaccgtggcgggccgccccaacgtcggcaaatccacgctgatcaacgcc
tggctcggcgaggagcgcctggtcgctttcgacatgcccggcaccacgcgcgacgccatc
agcgtgcccttcgagcgcaatggccaacgcttcgagctggtcgacacggccggcctgcgc
cgcaagggccgcgtgttcgaggcgatcgagaagttctccgtcatcaagacgctccaggcc
atcgagaacgccaacgtcgtgctgttgctgctcgacgccacccaaggcgtgaccgaccag
gacgcccacatcgcgggctacatcctggagagtggccgcgccgtggtggtggccatcaac
aaatgggacgcgatcgacagctaccagcgcgagcagctggagcgccagatcgaaaaccgc
ctggcattcctgaagttcgccgcgctgcaccgcatttcggcgaaaaagcgccagggcctg
gcgccgctgtgggcctccattgcccaggcgcacgcctcggccatgcgcaagatgcccacc
ccggtgctgacccgcctgctgcaggaggcggtggccttccaggcgccgtcacgcggtggc
caggcccggcccaagatgcgctacgcccaccagggcggcatgaaccccccggtgatcgtc
atccacggcaactcgctggaccgggtgcccgacgcctaccggcgcttcctggaggggcgc
tttcgcaaggccttcgacctcgtcggcaccccgctgcgcatcgagttcagaacctcgagc
aaccccttcaaagccgaatga
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