Hydrogenophaga sp. YM1: JNX00_14405
Help
Entry
JNX00_14405 CDS
T10285
Name
(GenBank) TRAP transporter permease
Organism
hyy Hydrogenophaga sp. YM1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
HlyE
Motif
Other DBs
NCBI-ProteinID:
QRR32855
LinkDB
All DBs
Position
3066489..3068543
Genome browser
AA seq
684 aa
AA seq
DB search
MSDATPSADTPTHAPLRGAIFWVAIAFSAYQIWMASFHPLSSQVIRAIHVGFVLLMIFAL
YPPFGQREGALGALGRALGWVLGGVGFLFGLYHWVYEADLTARAGELIAPDWVVGVVTIA
LVFEAARRVMGWGLPLICAMFLAYALFGQYLPGVLAHRGYGLDQVVGQLGFGTEGIYGTP
TYVSSTYIFLFILFGAFLEQAGMIRLFNDFAMGTVGHTRGGPAKVSVISSGLMGTINGSG
VANVVTTGQFTIPLMKRFGYSPAFAGGVEATASMGGQIMPPVMGAVAFIMAETINVPYVD
IVKAALIPAILYFGTAFWMVHLEAGRKGLLGLPKDECPNPWTAVKDRWYLLLPLAGLVGL
LFSGYTPLFSGTVGLGLTVILIFGAAVISGVKGHTLRVLAWVLLGLATAGFYRFGVGTFY
VITLLLIALTFALRRGGDARQLAVQSLVDGARHALPVAIACALVGVIIGVINLTGVAAEI
GGRVIAIGHDNLFLALLLTMLTCLVLGMGIPTIPNYIITSSLAAPVLLELGVPLIVSHMF
VFYFGIMADLTPPVALACFAAAPIARETGLKISVQAIRVAIAGFIMPFMAVYSPALMLQS
DDWGAVAYVVLKAVLAIAMWGAGAIGFLFAPLAWWERLWAVVAACFLVAALPLTDEIGLA
AIVLFVAWHWWRTRRPAMGRAGAR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcgacaccctctgccgacacccccacccacgcgcccttgcgcggcgccatc
ttctgggtggccatcgccttctcggcctaccagatctggatggcctcctttcatcccctg
tcgagccaggtgattcgggccatccacgtgggcttcgtcctgctgatgatcttcgccctg
tacccgcccttcggacagcgcgagggggcactgggcgcgctcggccgagcgctgggttgg
gtgctgggcggggtcggcttcctgttcgggctgtaccactgggtctacgaagccgacctg
accgcgcgcgcgggcgagctgattgcaccggactgggtggtcggtgtggtcaccatcgca
ctggtgttcgaggccgcgcgacgggtcatgggctggggcctgccgctgatctgcgcgatg
tttcttgcctacgccctgttcggccaatacctgcccggcgtgctcgcccaccggggctat
ggactcgaccaggtcgtcggccaactcggcttcggcaccgagggcatctacggcacgccc
acctacgtgtcgtccacctacatctttctgttcatcctgttcggcgccttcctggaacag
gccggcatgatccgcctgttcaacgacttcgccatgggcaccgtgggccacacccgaggc
ggcccggccaaggtgtcggtcatctcctccggactgatgggcaccatcaacggttccggc
gtggccaacgtggtcaccacgggccagttcaccattccgctgatgaaacggttcggctac
tcgccggccttcgccggcggcgtggaggccaccgccagcatgggcgggcagatcatgccg
ccggtgatgggcgcggtggccttcatcatggccgagacgatcaacgtgccctacgtggac
atcgtcaaggccgccttgattcccgccatcctctacttcggtaccgcgttctggatggtg
catctcgaagccggccgcaagggcctgctgggactgcccaaagacgaatgccccaatccc
tggaccgccgtcaaggaccgctggtatctcctgctgccactggccggcctggtcggcctg
ctgttctccggctacacaccgctgttctcgggcacggtggggctggggctcacggtcatc
ctgatcttcggcgccgccgtcatcagcggcgtcaaaggccatacgctgcgcgtgctggcc
tgggtgctgctgggcctggccacggcgggcttctaccgcttcggggtgggcaccttctac
gtgatcacgctgctgttgatcgccctgacctttgcgcttcgccgcggcggcgatgcccgc
cagctggccgtgcagagcctggtggatggagcgcgccacgcgctgccggtggccatcgcc
tgcgcgctcgtgggcgtgatcatcggggtcatcaacctcacgggcgtggcggccgaaatc
ggtggacgcgtgatcgccatcgggcacgacaacctgttcctggccctgctgctgaccatg
ctcacctgcctcgtgctgggcatgggcattccgaccatccccaactacatcatcaccagc
tcgctcgccgcaccggtgctgcttgaactcggcgtgccgctgatcgtctcgcacatgttc
gttttctacttcggcatcatggccgacctcacaccaccggtggccctggcctgcttcgcg
gccgcgcccatcgcgcgggagacggggctgaagatcagcgttcaggcgatccgcgtggcc
atcgccggattcatcatgcccttcatggcggtgtactcccccgcgctgatgctgcagagc
gacgactggggtgccgtggcctacgtcgtcctcaaggcggtgctggccatcgccatgtgg
ggggccggcgccatcggcttcctgttcgcgccgctggcgtggtgggaacgcctgtgggcg
gtggtggctgcctgcttcctggtggccgccctgccactcaccgacgagatcggcctggcg
gcgatcgtgctcttcgtcgcctggcactggtggcgcacgcgccgcccggcgatgggccgg
gccggcgcgcgctga
DBGET
integrated database retrieval system
