Hydrogenophaga sp. YM1: JNX00_14810
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Entry
JNX00_14810 CDS
T10285
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
hyy Hydrogenophaga sp. YM1
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyy03032
]
JNX00_14810
03036 Chromosome and associated proteins [BR:
hyy03036
]
JNX00_14810
03400 DNA repair and recombination proteins [BR:
hyy03400
]
JNX00_14810
DNA replication proteins [BR:
hyy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JNX00_14810
Chromosome and associated proteins [BR:
hyy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JNX00_14810
DNA repair and recombination proteins [BR:
hyy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JNX00_14810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
ALF
HU-CCDC81_euk_2
UBA_HYPK
Motif
Other DBs
NCBI-ProteinID:
QRR32929
LinkDB
All DBs
Position
complement(3146069..3146341)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELVEHIAKHADISKAAATRALDSTIAAIRTTLKKGGTVSLVGFGSFGVSKRPARKG
RNPRTGAEIKIKAAKVPKFRPGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaaaccgaactcgtcgaacacatcgccaagcacgccgacatctccaaggccgct
gcgacgcgtgctctcgactccaccatcgccgccatccgcaccacgctcaagaagggcggc
accgtttccctggtgggcttcggctcgttcggcgtgagcaaacgtcccgcccgcaagggc
cgcaacccgcgcaccggcgccgagattaaaatcaaggccgccaaggtgccgaagttccgc
cccggcaaggcactgaaggatgcggtcaactga
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