Hydrogenophaga sp. YM1: JNX00_16885
Help
Entry
JNX00_16885 CDS
T10285
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hyy Hydrogenophaga sp. YM1
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyy03400
]
JNX00_16885
Enzymes [BR:
hyy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JNX00_16885
DNA repair and recombination proteins [BR:
hyy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JNX00_16885
Prokaryotic type
JNX00_16885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QRR33306
LinkDB
All DBs
Position
3568693..3570171
Genome browser
AA seq
492 aa
AA seq
DB search
MSHFDAGLMWFRRDLRASDNAALHHALRHCRQLWCVFVFDRDILDPLPRADRRVEFIRES
LVALDARLRELGAEHGRPGTGLIVLHDQASRAIPALAERLGVQAVFANHDDEPAALARDA
QVLGALAHQGVLLRTHKDHVIFERREVLTQSERAFGVFTPYKNAWLKALTPFHLKAYPIA
KHAGALAPLPEGLSRPVPTLAEIGFQRTNLSQLALPTGEDGAHQLFDDFLQRIDRYDEAR
DYPAVKGPSYLSAHLRFGTVSVRALASIAHGLHAQGNPGASTWLSELIWRDFYHQILANF
PHVVQRAFKPAYDAVRYEHGKAADALFQAWCEGRTGYPLVDAAMAQILQTGYMHNRLRMV
VASFLVKDLGIHWQWGERYFAEHLIDFDLAANNGGWQWASSSGCDAQPWFRIFNPVTQSE
RFDPQGRFIRRYLPQLAGLPDAAIHAPWKASPVELAAAGLVLGDNYPLPLVDHAQAREKT
LARYAVVKEAGG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagccatttcgacgccggcctgatgtggttccgccgcgacctgcgcgccagcgacaac
gcggccctgcaccacgcgctgcgccactgccgccagctgtggtgcgtgttcgtgttcgac
cgcgacatcctggacccgctgccgcgcgccgaccgccgggtggagttcatccgcgaatcg
ctggtggcgctggacgcgcggctgcgcgagctgggcgccgagcacggccggccgggcact
ggcctgatcgtgctgcacgaccaggcctcgcgcgccatccccgcgctggccgagcgcctg
ggcgtgcaggccgtgttcgccaaccacgacgacgaacccgccgcgctggcgcgcgacgcc
caggtgctgggcgcgctggcgcaccagggcgtgctgctgcgcacccacaaggaccacgtg
atcttcgagcgccgcgaggtgctcacgcagtccgagcgggccttcggcgtgttcacgccc
tacaaaaacgcctggctcaaggcgctcacgcccttccacctcaaggcctacccgatcgcc
aagcacgcgggcgcgctggcgcccttgcccgagggcctgtcgcgcccggtgcccacgctg
gcggagattggcttccagcgcaccaacctgtcacagctcgccctgcccaccggcgaggac
ggcgcgcaccagctgttcgacgacttcctgcagcgcatcgaccgctacgacgaggcgcgc
gactacccggcggtcaagggccccagctacctgagcgcgcacctgcgcttcggcaccgtg
tccgtgcgcgcgctggcgtccatcgcacacgggctgcacgcccagggcaacccgggcgcc
agcacctggctgtccgagctcatctggcgcgacttctaccaccagatcctggccaacttc
ccgcacgtggtgcagcgcgccttcaagcctgcctacgacgccgtgcgctacgagcacggc
aaagccgccgacgccctgttccaggcctggtgcgagggccgcaccggctacccgctggtg
gacgcggccatggcgcagattctccagaccggctacatgcacaaccgcctgcgcatggtg
gtggccagctttctggtgaaggacctcggcatccactggcaatggggcgagcgctacttc
gccgagcacctgatcgacttcgacctcgcggccaacaacggcggctggcagtgggccagc
tccagcggctgcgacgcgcaaccctggttccgcatcttcaaccccgtcacccagagcgaa
cgcttcgacccgcagggccggttcatccggcgctacctgccccagctcgccggcctgccc
gacgcggcgatccatgcgccctggaaggccagcccggtggagctggccgccgccggcctg
gtgctcggcgacaactaccccctgccgctggtggaccacgcgcaggcccgcgagaagacc
ctggcgcgttatgcggtggtgaaagaagcggggggctga
DBGET
integrated database retrieval system
