Hydrogenophaga sp. YM1: JNX00_16935
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Entry
JNX00_16935 CDS
T10285
Name
(GenBank) Fis family transcriptional regulator
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
hyy Hydrogenophaga sp. YM1
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyy03000
]
JNX00_16935
03036 Chromosome and associated proteins [BR:
hyy03036
]
JNX00_16935
03400 DNA repair and recombination proteins [BR:
hyy03400
]
JNX00_16935
Transcription factors [BR:
hyy03000
]
Prokaryotic type
Helix-turn-helix
Other families
JNX00_16935
Chromosome and associated proteins [BR:
hyy03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
JNX00_16935
DNA repair and recombination proteins [BR:
hyy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
JNX00_16935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
Xre-like-HTH
HTH_30
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QRR33316
LinkDB
All DBs
Position
complement(3584359..3584598)
Genome browser
AA seq
79 aa
AA seq
DB search
MKKTNPLDECIRDSLEGYFRDLDGTEPAHLYDMLVKAVERPLLEVVMAQAQYNQSRAAQW
LGLNRNTLRKKLLDHGLLD
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacgaatccgctggacgagtgcatccgcgacagcctcgagggctacttccgc
gacctcgatggcaccgagcccgcccacctttacgacatgctggtgaaagcggtggagcgt
cccctgctcgaggtggtgatggcccaggcccagtacaaccagtcgcgcgccgcgcagtgg
ctgggcctgaaccgcaacaccctgcgcaagaagctgctcgaccacggcctgctcgactga
DBGET
integrated database retrieval system
