Hydrogenophaga sp. YM1: JNX00_17085
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Entry
JNX00_17085 CDS
T10285
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy02010
ABC transporters
hyy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JNX00_17085
03070 Bacterial secretion system
JNX00_17085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyy02000
]
JNX00_17085
02044 Secretion system [BR:
hyy02044
]
JNX00_17085
Transporters [BR:
hyy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JNX00_17085
Secretion system [BR:
hyy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JNX00_17085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_16
AAA_30
AAA_29
AAA_22
NB-ARC
MeaB
DUF87
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
QRR33343
LinkDB
All DBs
Position
complement(3615073..3617286)
Genome browser
AA seq
737 aa
AA seq
DB search
MSDPTLDAPDASGPARADEAPPLPPRRSAERDSGIACLVMIARLHGVAADPDQIAHGFAH
DGRALDVPGLLLAAKQLGLVAKRVRVDPARLAKTPLPAIAIGLEAVDGTPGGADFFLLAR
IDQGRALIQSPGVGRPESLSLDALQAQWSGELILFTSRATIAGEMAKFDFTWFIPAVVKY
RRLLLEVLGVSFALQLFALITPLFFQVVMDKVLVHRGYTTLDVIAIAFAVVVVFEVVLGG
LRSFVFAHTTSRIDVELGARLFRHLLGLPLQYFQARRVGDSVARVRELENIRAFLTGNAL
TVVLDLLFSVVFLAVMAYYSGWLTLIVLASLPCYVLVTAVCTPILRARLHEKFNRGAENQ
AFLVETISGIDTVKAMAVEPQWTRRWDQQLAGYVSASFRTATIGTLANSAVTLISKSVTV
LTLYFGARFVIEGDLSVGQLIAFNMLAGQVAQPVMRLANLWTDFQQTGISVQRLGDILNT
RTEVAGQKAALPPLAGRVTFEGVHFRYRPDGPEVLSDLSLDIAPGTVVGVVGRSGSGKST
LTKLVQRLYAPERGRVLVDGIDLLMADASSLRRQVGVVLQENVLFARSVRDNIALADPGA
PLEAVVRAARLAGAHEFIAELPEGYDTMVGEHGSTLSGGQRQRIAIARALMTNPRILILD
EATSALDYESERIVQQNMQRIAQGRTVIIVAHRLSAVRDAHRIVVMERGRIVESATHAEL
LARPGSRYGQLWRLQQA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacccgacgctggacgcgccggatgcctcggggcctgcgcgcgccgatgaggca
ccgccattgcctccaaggcgctccgccgagcgggacagcggcatcgcctgcctggtgatg
atcgcccgtctgcacggcgtggcggcggacccggaccagatcgcgcacgggttcgctcac
gacggccgggccctggacgtaccgggcttgctgctggcggcaaagcagctcggcctcgtc
gccaagcgcgtgcgagtggacccggcgcggttggccaagacgccgctgccggcgatcgcg
atcggcttggaagccgtggacggtacgccgggcggggccgacttcttccttctcgcccgc
attgatcaaggtcgtgcgctcatccagtcccctggcgtcggccgccccgagtccctcagc
ctcgacgccctgcaagcccagtggtccggcgagctcatcctcttcacttcgcgcgcaacc
atcgccggcgagatggcgaagttcgatttcacctggttcattcccgccgtggtgaagtac
cgccgcctgctgctggaggtgctgggcgtgagcttcgctctgcagctcttcgcgctcatc
acgccgctgttcttccaggtggtgatggacaaggtgctggtgcaccgtgggtacaccacc
ttggacgtgatcgccatcgccttcgctgtggtggtggtgttcgaggtggtgctgggcggc
ttgcgcagcttcgtgttcgcgcacaccaccagccgcatcgacgtggagttgggcgctcgc
ctgttccgccacctgctgggtctgcctttgcagtacttccaggcccggcgcgtgggcgat
tcggtggcgcgcgtgcgcgagctggagaacatccgcgccttcctcaccggcaacgcgctc
acggtggtgctcgacctgctgttctccgtcgtcttcctggcggtgatggcgtactacagc
ggttggctcacgctgatcgtgctcgcctcgctgccgtgttacgtgctggtgacggcggtg
tgcacgcccatcctgcgcgcgcgcctgcacgagaagttcaaccgcggggcggaaaaccag
gcctttctggtggagaccatcagcggcatcgacacggtcaaggccatggcggtggagccg
cagtggacgcgccgctgggaccagcagctcgcgggctacgtgtccgcgagtttccgaacg
gcgaccattggcaccttggccaacagcgcggtcacgttgatctcgaagtcggtgacggtg
ctcacgctgtatttcggcgcgcgcttcgttatcgagggcgatctgtccgtgggccaactg
atcgccttcaacatgctggcgggccaggtggcgcagccggtgatgcgcctggccaatctg
tggacggactttcaacagaccgggatttcggttcagcggctgggcgacatcctgaacacg
cgcaccgaggtggcgggccagaaggcggcgctgccgccattggccggacgggtcacgttc
gaaggcgtgcatttccgctaccggccggacggccccgaggtgttgagcgacctgtcgttg
gacatcgcgccgggcacggtggtgggggtggtggggcgttcgggttcgggcaagagcacc
ctgaccaagctggtgcagcgcctgtacgcgcccgagcgcgggcgggtcctggtggacggt
atcgacctgctgatggccgatgcgagctccctgcgccgccaggtgggcgtggtgctgcag
gagaacgtgctcttcgcgcgcagcgtgcgcgacaacatcgccctggccgacccgggcgcg
ccgctggaggcggtggtgcgcgccgctcgcctggcgggggcgcacgagttcatcgccgag
cttcccgagggttacgacacgatggtgggtgagcacggttccaccctgtccggcgggcag
cggcaacgcatcgccatcgcgcgcgcgctcatgaccaatccgcgcatcctcatcctggat
gaggccacgagtgcgctggactacgagagcgagcgcatcgtgcagcagaacatgcagcgc
atcgcccagggacgcacggtgatcatcgtggcgcaccggctgagcgcggtgcgcgacgcg
caccgcatcgtggtgatggagcgtggccggattgtggagtcggccacccacgcggaactg
ctggcgcggccgggcagccgctacggccagttgtggcgtctgcagcaggcgtga
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integrated database retrieval system
