Hydrogenophaga sp. YM1: JNX00_17665
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Entry
JNX00_17665 CDS
T10285
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy00061
Fatty acid biosynthesis
hyy00071
Fatty acid degradation
hyy01100
Metabolic pathways
hyy01212
Fatty acid metabolism
hyy02024
Quorum sensing
hyy04146
Peroxisome
Module
hyy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JNX00_17665
00071 Fatty acid degradation
JNX00_17665
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JNX00_17665
09145 Cellular community - prokaryotes
02024 Quorum sensing
JNX00_17665
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hyy01004
]
JNX00_17665
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hyy04147
]
JNX00_17665
Enzymes [BR:
hyy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JNX00_17665
Lipid biosynthesis proteins [BR:
hyy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JNX00_17665
Exosome [BR:
hyy04147
]
Exosomal proteins
Exosomal proteins of breast milk
JNX00_17665
Exosomal proteins of breast cancer cells
JNX00_17665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QRR33450
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All DBs
Position
3749060..3750916
Genome browser
AA seq
618 aa
AA seq
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MSYLWDLSHIQPQTASVLDGDTIPAMFWNAVRARGPNVWMRQKDLGLWRSWTWTQTGQAV
REIAHGLMALGFAPKETASILSNTTIEWVLADLAVLSAGGVANGIYPTDAPEQVHYLCED
SRTTVLFVEDEEQLDKTLAVRAQLPLLRKIVVVDMEGLRDFHDDQVISLDALRALGRDHL
AQHPQMLEQRVAGVGPDDLAILVYTSGTTGKPKGAMHSHKGLVYTVRGYNAILPRYDSDE
CMCFLPLCHIAERMGGEYFSLYTGARLNFVENPETVPENVREIAPTVFTAVPRVWEKFYS
GVMIALKEASRLQQAAYAWAIGVGQRVADHVLKGEAVPGGLKLRFRLARLLVLDNVRKLI
GIHRSRFLVTGAAPISPDLVRWYLALGVPMLEVWGMTETCGASTGVPAQRIKPGSIGPAA
QYNEVRLDAATGEILVRGPNVFMGYLNLPEKTAETIDAEGWLHTGDVGVVDEEGFFRITD
RMKDIIITAGGKNITPSEIENELKFSPYVTDAVVIGDQRPYLTVIIMIDQENVEKFAQDN
DVPFSNYASLTRTAEVQQLIQGLIDATNRKFARVEQIKKFWLLDTQLTAEDEELTPTMKL
KRKLVQKKYAEQIEAMYH
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagctacctctgggacctctcccacatccagccccagacggccagcgtgctggacggc
gacaccattcccgcgatgttctggaacgccgtgcgcgcgcgcggcccgaacgtgtggatg
cgccagaaggacctgggcctgtggcgcagctggacctggacgcagaccggccaggccgtg
cgcgagatcgcccacggcctcatggccctgggcttcgcgcccaaggaaaccgcgtccatc
ctgtccaacaccaccatcgagtgggtgctggccgacctggccgtgctgagcgcgggcggc
gtggccaacggcatctaccccacggacgcgcccgagcaggtgcactacctctgcgaggac
tcgcgcaccaccgtgctgttcgtggaggacgaggagcagctcgacaagaccctggccgtg
cgcgcccagctgccactgctgcgcaagatcgtggtggtcgacatggaaggcctgcgcgac
ttccacgacgaccaggtgatcagcctggacgccctgcgcgccctgggccgcgaccacctg
gcgcagcacccgcagatgctggaacagcgcgtggccggcgtgggcccggacgacctcgcc
atcctggtctacacctcgggcaccacgggcaagcccaagggcgccatgcactcgcacaaa
ggcctcgtctacaccgtgcgcggctacaacgccatcctgccgcgctacgacagcgacgag
tgcatgtgcttcctgccgctgtgccacatcgccgaacgcatgggcggcgagtacttctcg
ctctacaccggcgcgcggctgaacttcgtcgagaaccccgagaccgtgcccgagaacgtg
cgcgagatcgcgcccacggtcttcaccgccgtgccgcgcgtgtgggagaagttctactcg
ggcgtgatgatcgccctgaaggaagcgagccggctgcagcaggccgcctacgcctgggcc
atcggcgtcggccagcgcgtggccgatcacgtgctcaagggcgaagccgtgccgggtggc
ctcaagctgcgctttcggctcgcgcgcctgctggtgctcgacaacgtgcgcaagctcatc
ggcatccaccgctcgcgcttcctcgtcacgggcgcggcgcccatctcacccgacctggtg
cgctggtacctcgcgctgggcgtgcccatgctcgaggtctggggcatgacggagacctgc
ggcgcctccaccggcgtgccggcgcagcgcatcaagcccggcagcatcggcccggcggcg
cagtacaacgaggtccgcctcgacgccgccaccggcgagatcctggtgcgcgggcccaac
gtcttcatgggctacctcaacctgcccgagaaaaccgccgagaccatcgacgccgagggc
tggctgcacaccggcgacgtgggcgtggtggacgaggaaggcttcttccgcatcaccgac
cgcatgaaggacatcatcatcacggccggcggcaagaacatcacgcccagcgagatcgag
aacgagctgaagttctcgccctacgtcaccgacgcggtcgtcatcggcgaccagcgcccc
tacctcacggtgatcatcatgatcgaccaggagaacgtcgagaagttcgcgcaggacaac
gacgtgcccttctccaactacgccagcctcacgcgaacggccgaggtgcagcagctcatc
caggggctcatcgacgccaccaaccgcaagttcgcgcgcgtcgagcagatcaagaagttc
tggctgctcgacacccagctcaccgccgaggacgaagagctcacgccgaccatgaagctc
aagcgcaagctcgtgcagaagaagtacgccgagcagatcgaggccatgtaccactga
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