Hydrogenophaga sp. YM1: JNX00_17725
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Entry
JNX00_17725 CDS
T10285
Name
(GenBank) ATP-grasp domain-containing protein
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy00907
Pinene, camphor and geraniol degradation
hyy01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JNX00_17725
Enzymes [BR:
hyy01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
JNX00_17725
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Paralog
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GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Biotin_lipoyl
Dala_Dala_lig_C
BSH_CzcB
BSH_CusB
DUF3182
BSH_RND
BSH_YhbJ
FGAR-AT_PurM_N-like
ATP-grasp_3
LAL_C2
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
QRR33462
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All DBs
Position
complement(3763938..3765866)
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AA seq
642 aa
AA seq
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MKRLLIANRGEIARRVIRTAHRMGIATVAVFSEPDARAPHVREAGMAFALGGAGSAESYL
RIDRLIAAARATGADALHPGYGFLSENADFAQAVIDAGLTWVGPPPEAIRALGSKSAAKA
LAQAHGVPVLPGYFGADQGDGTFAAEAERIGYPVMVKAVAGGGGRGMRLVAEAAQLPAAL
ASARAEALAGFGSADLLIESAVRRPRHVEVQVFADAQGRCIHLGERDCSVQRRHQKIVEE
APSPAVTPELRERLGEAAVALARAAGYVGAGTVEFLLDGNRFFLMEMNTRLQVEHPVTEM
LTGLDLVEWQIRVARGEPLPLAQDQVRLQGHAIEVRLCAEDERFAPHTGTVRAFAEPPLG
EGLRFDHAIETGTEVTPHYDALLGKLIAHAPTRAQAIERLAHALDATVLLGLPTNRALLA
ACLRHPVFGAGEALIPFLAEQGEGLRDALRPPAEAVLAGVLVAACADRPAPGALPCPFAR
PLRWRHGDAVLDLAVLEHGHGRLSVVLGDRTHEALLQPQGVAIDGVRHATTAVALGDGHW
QVQVGPHTLTLSDLSHRARTRAGAAGAVGELRAPFNGKLVAVHARPGARVAKGEALFAIE
SMKIEHLIAAPRDATVQAVSVSAGQQVAPGQLLVSFVAEATA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcgcctgctcatcgccaaccgcggcgagatcgcgcgccgcgtgatccgcaccgcg
caccgcatgggcatcgccaccgtggcggtgttcagcgagcccgacgcgcgcgcgccgcac
gtgcgcgaggccggcatggccttcgcgctcggcggcgcgggctcggccgagtcctacctg
cgcatcgatcgcctgatcgccgccgcgcgcgccaccggcgccgacgcgctgcaccccggc
tacggtttcctcagcgagaacgccgacttcgcgcaggccgtgatcgacgccggcctcacc
tgggtgggtccgccgcccgaggccatccgcgcgctgggcagcaagtcggccgccaaggcc
ctggcgcaagcgcatggcgtgccggtgctgccgggctacttcggcgccgaccaaggcgac
gggaccttcgccgccgaggccgagcgcatcggctacccggtgatggtgaaggccgtggcg
gggggcggcgggcgcggcatgcgcctcgtcgccgaggccgcgcagctgcccgccgcgctg
gccagcgcgcgcgccgaggcgctggccggcttcggcagcgcggacctgctgatcgagtcg
gccgtgcggcgcccgcgccacgtggaagtgcaggtcttcgccgacgcgcaggggcgctgc
atccacctgggcgagcgcgactgctcggtgcagcggcgccaccagaagatcgtcgaggaa
gcgccgagcccggcggtcacgccggaactgcgcgagcgcctgggcgaggccgcggtggcg
ctggcgcgcgcggcgggctacgtgggcgcgggcacggtggagttcctgctggacggcaac
cggttctttttgatggagatgaacacccgcctgcaggtggagcacccggtgacggagatg
ctcaccggcctggacctggtggagtggcagatccgcgtggcgcgcggcgagccgctgccg
ctggcgcaggaccaggtgcgcctgcaaggccacgccatcgaggtgcgcctgtgcgccgag
gacgagcgcttcgcgccccacaccggcaccgtgcgcgccttcgccgaacccccgctgggc
gagggcctgcgcttcgaccacgccatcgagaccggcacggaggtgacgccgcactacgac
gccctgctgggcaagctcatcgcccacgcgcccacgcgcgcgcaggccatcgaacgcctc
gcgcacgcgctggacgcgaccgtgctcctgggcctgcccaccaaccgcgccttgctggcg
gcctgcctgcgccacccggtgttcggcgcgggcgaggcgctcatcccctttctggcggag
cagggtgagggcctgcgcgatgccttgcggccgccggccgaggcggtgctggccggggtg
ctggtcgcggcctgcgcggatcggcccgcgcccggcgcgctgccgtgccccttcgcgcgg
ccgctgcgctggcggcacggcgacgcggtgctcgacctcgccgtgctggaacacggccac
ggccgcctgagcgtcgtgctgggcgatcgcacgcacgaggcccttctgcaaccccagggc
gtcgccatcgacggcgtgcgccacgccaccaccgccgtcgcgctgggcgacggccactgg
caggtgcaggtgggcccgcacacgctcacgctcagcgacctgagccaccgcgcgcgaacc
cgtgccggcgccgctggcgcggtgggcgagctgcgcgcgcccttcaacggcaagctcgtg
gccgtgcacgcccggcccggcgcgcgcgtggccaagggcgaggcgctgttcgccatcgag
agcatgaagatcgagcacctgatcgccgcgccgcgcgacgccacggtgcaggccgtgtcc
gtgtcggccggacagcaggtggcgccggggcaactgctcgtcagctttgtggcagaggca
acggcatga
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