Hydrogenophaga sp. YM1: JNX00_18240
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Entry
JNX00_18240 CDS
T10285
Name
(GenBank) rRNA pseudouridine synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
hyy Hydrogenophaga sp. YM1
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hyy03009
]
JNX00_18240
Enzymes [BR:
hyy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
JNX00_18240
Ribosome biogenesis [BR:
hyy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JNX00_18240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QRR36549
LinkDB
All DBs
Position
complement(3880237..3881112)
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AA seq
291 aa
AA seq
DB search
MQPAATATAPRASEPGKAPRRDAAPPPAPATPRDGTRLNKRLAELGLCSRREADEWIANG
WVSVDGAVAAIGQAVGPGARIEVLPAAQRAQGERVTILLHKPVGYVSGQPEDGHEAAVVL
LNARTHWKDDRSPRRFSPAQLKGLAPAGRLDIDSTGLLVLTQDGRVARALIGEDSEVEKE
YLVRVVWAPHGPKGPGVVEQDVQAVFPAERLARLRHGLSLDGQPLRPAGVDWLNPEQLRF
VLTEGKKRQIRRMCEAVGLHVVGLKRVRIGRVALGQLPQGQWRYLLPDEVF
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcccgcggccaccgccacggccccccgggccagcgagcccggcaaggcgccccgc
cgcgacgccgccccacctcctgcgcccgccacgccccgcgacggcacgcgcctcaacaag
cgcctggccgagctgggcctgtgctcgcgccgcgaggccgacgagtggatcgccaatggc
tgggtcagcgtggacggcgccgtggccgccataggacaggcggtggggcccggcgcccgc
atcgaggtgctgcccgccgcgcaaagggcccagggcgagcgcgtcaccatcctgctgcac
aagcccgtgggctatgtgagcggccagcccgaggacggccacgaggccgccgtcgtgctg
ctgaacgccaggacccactggaaggacgaccgcagcccgcgccgcttctcgcccgcgcag
ctcaagggcctggcgccggccggccggctcgacatcgactccaccggcctgctcgtgctc
acgcaggacgggcgggtcgcccgcgcccttatcggcgaggacagcgaggtggagaaggag
tacctggtgcgcgtggtgtgggcgccgcacgggccgaaagggccgggcgtggtcgagcag
gacgtgcaggccgtgttccccgccgaacggctggcgcggctgcgccacggcctgtcgctc
gatggccagccgctcaggcccgcgggcgtggactggctcaaccccgagcagctgcgcttt
gtgctcaccgagggcaagaagcgccagatccgccgcatgtgcgaggcggtgggcctgcac
gtggtgggcctcaagcgagtgcgcatcggccgcgtggccctgggccagctgccccagggg
cagtggcgctacctgcttcccgacgaagtgttctga
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