Hydrogenophaga sp. YM1: JNX00_18790
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Entry
JNX00_18790 CDS
T10285
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy02010
ABC transporters
hyy02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JNX00_18790
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JNX00_18790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyy02000
]
JNX00_18790
Transporters [BR:
hyy02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
JNX00_18790
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
QRR33665
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All DBs
Position
complement(3997086..3998048)
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AA seq
320 aa
AA seq
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MKYRSRLLALAAVAALGLSSPLLAQAQNKVNLGVAIPAATHSFAAGLVYWANEAKKELEK
DPNIKVTIKTASGAPEQANQLQDLVTATKIDSLVILPFESAALTRPVQQVKAKGVYVTVV
DRGLTDTSAQDAYVSGDNTAFGKVPAEYLAKFLNGKGNIVALRGIPTTIDNERMDAFTAV
MKNHPGIKILDAKHGNWNRDDAFKVMQDFLTRFKEIDAVWAADDDMAFGVLRAIEQAKRK
DIKIVFGGAGAKSMVKTLMDGSNPLIQANVSYSPKFLYEAIKMTALARKKGEKLPASTIV
PSVLITKQNAKDFYFPDSPF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaagtaccgttcccgtctgctcgcgctggccgccgtggccgcgctggggctgtccagc
ccgctgctggcgcaggcccagaacaaggtgaacctgggcgtggccatcccggccgccacc
cacagcttcgccgccggcctggtgtactgggccaacgaagcgaagaaagaactggagaag
gaccccaacatcaaggtcaccatcaagaccgccagcggcgcgcccgagcaggccaaccag
ctgcaggacctggtgaccgcgaccaagatcgactcgctggtgatcctgcccttcgaatcg
gccgcgctcacgcgcccggtgcagcaggtcaaggccaagggcgtgtacgtgaccgtggtc
gaccgcggcctgaccgataccagcgcgcaggacgcctatgtgtccggcgacaacaccgcc
ttcggcaaggtgccggccgagtacctggccaagttcctcaacggcaagggcaacatcgtc
gcgctgcgtggcatccccaccaccatcgacaacgagcgcatggacgccttcaccgcggtc
atgaagaaccacccgggcatcaagatcctggacgccaagcacggcaactggaaccgcgac
gacgccttcaaggtgatgcaggacttcctcacgcgcttcaaggagatcgacgccgtgtgg
gcggccgacgacgacatggccttcggcgtgctgcgcgccatcgagcaggccaagcgcaag
gacatcaagatcgtgttcggcggcgcgggcgccaagtccatggtcaagacgctcatggac
ggcagcaacccgctgatccaggcgaacgtgtcctactcgcccaagttcctctacgaggcg
atcaagatgaccgcgctggcgcgcaagaagggcgagaagctgccggcctcgaccatcgtg
ccgtcggtgctcatcaccaagcagaacgccaaggacttctacttccccgacagcccgttc
tga
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