Hydrogenophaga sp. YM1: JNX00_18930
Help
Entry
JNX00_18930 CDS
T10285
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JNX00_18930 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyy03021
]
JNX00_18930 (rpoA)
03400 DNA repair and recombination proteins [BR:
hyy03400
]
JNX00_18930 (rpoA)
Enzymes [BR:
hyy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JNX00_18930 (rpoA)
Transcription machinery [BR:
hyy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JNX00_18930 (rpoA)
DNA repair and recombination proteins [BR:
hyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JNX00_18930 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QRR33689
LinkDB
All DBs
Position
complement(4026619..4027602)
Genome browser
AA seq
327 aa
AA seq
DB search
MLNNLLKPKSINVEQLSANRAKVTLEPFERGYGHTLGNALRRVLLSSMVGHAPTEVTIAG
VVHEYSSIDGVQEDVVNLLLNLKGVVFKLHNRDEVTLSLRKDGEGVVTAADIQTPHDVEI
VNPDHVIATLSAGAKLDMQIKVEKGRGYVPGTLRRGDEAARSIGRIVLDASFSPVKRVSY
TVESARVEQRTDLDKLVLEIETNGSIGPEEAVRASAKILVEQLAVFAQLEGADLFTEAPQ
QRSSQQFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKEVLASRGLTLGMKLENWPPAGLDKH
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacaacctgctcaagcccaagtccatcaacgtcgagcaactctcggccaatcgc
gccaaggtcacgctggagcccttcgaacgtggctacgggcacaccctgggcaacgccctg
cgccgcgtgctgctgtcgtccatggtgggccatgcccccaccgaagtgaccatcgctggc
gtggtgcacgaatactcgtccatcgacggcgttcaggaagacgtggtcaacctgctgctc
aacctcaagggcgtggtgttcaagctccacaaccgcgacgaggtgaccctgagtctgcgc
aaggacggtgaaggggtcgtgacggccgccgacatccagaccccgcacgacgtcgagatc
gtcaaccccgaccacgtcatcgccacgctgtcggccggtgccaaactggacatgcagatc
aaggtcgagaagggccgcggctacgtgcccggcaccctgcgccgcggcgacgaagccgcc
cgctcgatcggccgcatcgtcctcgacgcctccttctcgccggtcaagcgcgtgagctac
acggtggaaagcgcccgcgtcgagcagcgcaccgacctcgacaagctcgtgctcgagatc
gagaccaacggctccattggccccgaagaggccgtgcgcgcctcggccaagatcctcgtt
gaacagctcgccgtgttcgcccagctggaaggcgccgacctcttcaccgaggccccgcaa
cagcgcagctcgcagcagttcgatccgatcctgctgcgtcccgtggacgagctcgaactc
accgtgcgttcggcgaactgcctgaaggccgagaacatctattacatcggtgacctgatt
cagcgcaccgagaacgagctgctcaagaccccgaacctgggccgcaagtcgctcaacgaa
atcaaggaagtgttggcctcgcgtggtctcacgctgggcatgaagctcgagaactggccg
cccgccggcctcgacaagcactga
DBGET
integrated database retrieval system
