Hydrogenophaga sp. YM1: JNX00_21500
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Entry
JNX00_21500 CDS
T10285
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy03030
DNA replication
hyy03430
Mismatch repair
hyy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JNX00_21500
03430 Mismatch repair
JNX00_21500
03440 Homologous recombination
JNX00_21500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyy03032
]
JNX00_21500
03400 DNA repair and recombination proteins [BR:
hyy03400
]
JNX00_21500
Enzymes [BR:
hyy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JNX00_21500
DNA replication proteins [BR:
hyy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JNX00_21500
DNA repair and recombination proteins [BR:
hyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JNX00_21500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
QRR34172
LinkDB
All DBs
Position
complement(4557489..4558541)
Genome browser
AA seq
350 aa
AA seq
DB search
MQLAANQLQAQLQKGLRSLYTLHGDEPLLIQEAGDAIRAAARAQGYTERTVHTMAGAHAD
WSAVLASGASLSLFADKQIVEVRVPSGKPGKDGSAALQQLAESADGNDSTLTLVVLPRLD
MATQKSAWFAALDAHGVTVRVDPVDRKALPQWIATRLQAQGQRVAAGEEGQRTLAFFADR
VEGNLLAAHQEIQKLALLHPQGELGFEQVESAVLNVARFDAFKLAEAVLAGQVARVQRML
DGLQAEGEAPVLVHWALAEDIRTLNRVRGAVDDGRPLPIALRESRVWGVKEKLVERVLPT
LGSAQLARWLDDAHTVDGIVKGLKFPDWPAEPWQALHQLAMKVARACAPR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcgccgcgaaccagctccaggcccagctccagaagggcctgcgcagcctctac
accctgcacggcgacgagccgctgctgatccaggaagcgggcgacgccatccgcgccgcc
gcgcgcgcccagggctacaccgagcgcaccgtgcacaccatggccggcgcgcacgccgac
tggtcggcggtgctggccagcggcgcgtcgctgagcctgttcgccgacaagcagatcgtc
gaggtgcgcgtgccctcgggcaagcccggcaaggacggctcggccgccctgcagcagctc
gccgagtccgccgacggcaatgacagcacgctcaccctggtggtgctgccgcgcctggac
atggccacccagaaaagcgcctggttcgccgcgctcgacgcccacggcgtgaccgtgcgc
gtcgacccggtggaccgaaaggcgctgccgcagtggatcgccacgcgcctgcaggcccag
ggccagcgcgtggccgcgggcgaggagggccagcgcaccctggccttcttcgccgaccgc
gtcgaaggcaacctgctggccgcgcaccaggagatccagaagctcgcgctgctgcaccca
cagggcgagctgggcttcgagcaggtcgagtcggccgtgctcaacgtggcgcgcttcgat
gccttcaagctcgccgaggccgtgctggccggccaagtggcgcgtgtgcagcgcatgctc
gacggcctgcaggccgagggcgaggcgcccgtgctggtgcactgggcgctggccgaggac
atccgcacgctcaaccgcgtgcgcggcgcggtggacgacggccgcccgctgcccatcgcc
ctgcgcgaaagccgcgtctggggcgtgaaggaaaagctggtcgagcgcgtgctgcccacg
ctgggctcggcgcagctggcgcgctggctggacgacgcccacaccgtggacggcatcgtc
aagggcctgaaattccccgactggcccgccgagccctggcaggccctgcaccagctggcg
atgaaggtggcgcgcgcctgcgcgccgcgctga
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